Detailed information NTG0861298

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: Q5H80_RS11330
• Genome accession: NZ_CP130748
• Coordinates: 2592719..2596108 (+)
• Length: 1129 a.a.
• NCBI ID: WP_304564811.1
• Uniprot ID: -
• Organism: Vibrio sp. SNU_ST1
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2587719..2601108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q5H80_RS11305 (Q5H80_11305)	erpA	2587741..2588082 (-)	342	WP_004734539.1	iron-sulfur cluster insertion protein ErpA	-
Q5H80_RS11310 (Q5H80_11310)	hemL	2588379..2589674 (+)	1296	WP_304564808.1	glutamate-1-semialdehyde 2,1-aminomutase	-
Q5H80_RS11315 (Q5H80_11315)	-	2590081..2590206 (-)	126	WP_304564809.1	hypothetical protein	-
Q5H80_RS11320 (Q5H80_11320)	-	2590283..2591368 (+)	1086	WP_009847558.1	AI-2E family transporter	-
Q5H80_RS11325 (Q5H80_11325)	rsmC	2591479..2592501 (+)	1023	WP_304564810.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
Q5H80_RS11330 (Q5H80_11330)	chiS	2592719..2596108 (+)	3390	WP_304564811.1	response regulator	Regulator
Q5H80_RS11335 (Q5H80_11335)	-	2596818..2598500 (+)	1683	WP_009847561.1	ABC transporter substrate-binding protein	-
Q5H80_RS11340 (Q5H80_11340)	-	2598670..2599656 (+)	987	WP_009847562.1	ABC transporter permease	-
Q5H80_RS11345 (Q5H80_11345)	-	2599659..2600684 (+)	1026	WP_135382805.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127255.93 Da
• Isoelectric Point: 5.3693

>NTDB_id=861298 Q5H80_RS11330 WP_304564811.1 2592719..2596108(+) (chiS) [Vibrio sp. SNU_ST1]
MFRFYRKQKFKRLQNTLMLAFLVLSITPVTLIAIFFLQSHSQDLQEQSTSHLVSVRDTKQQQIVDYLQAQESQVMGFVRS
ELANASGGRFYGLINAFQRLGLDIDEARANAQQRYIKGSGDQIKTSILPESSSFIGSERYRLLHKRYHNSYLELLKRSDF
DDILLVDINGNIAYSVFKRDDYGTNLLTGKYKDANLGKTFQRLEKDVKDKRKSNEDYTPVIVSDFKDENGKQTAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNIQTLLVGDDHLPRSLAHSQESINLSLDVVDKALAGETAVGTFDNAQDQA
IIAAYTPIELKYATWALVVELPEKEAFARIHQLEKIFVIVMLTAIILVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TMINTERKDEIGRLAVSFERMQRSIREKMLLIKSQNDELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDINKSAVDLSAATSLVLELSHHLLGNKPIRI
INQVPCDLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEYLEHIFEPLIQAGQDSS
NYRQGAGLGLSISRQLIELMGGSLYVSSQPMLGTTFSFTLPLATQEELDNYSDSGSYSHFQAPDLIDNSQQENSVISEDP
NGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCEALRKQYDHAQLPII
MLTALNQAEDRVRGFEAGANDYLSKPFNKQELAARITAHLSASKAEQRRLENDQLQLELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRGQEQLKRSMADEIIAPKYLKVEHAHYCGDIDIYIDDTRQRIPSDILKLPEG
SGLDTMYIFNVGGGVNSNRVNNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKATGEGKNKQELMREVLVDVMTN
AIIYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSIEFILEHCKEQTPERTHIETLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=861298 Q5H80_RS11330 WP_304564811.1 2592719..2596108(+) (chiS) [Vibrio sp. SNU_ST1]
ATGTTTAGATTCTATCGTAAGCAGAAGTTTAAGCGCCTTCAAAACACTCTAATGCTGGCATTTCTTGTCCTTAGTATTAC
CCCTGTGACACTTATCGCGATATTTTTCCTCCAATCGCACAGTCAGGATCTTCAGGAACAAAGTACTTCGCACCTTGTTT
CGGTCCGTGATACTAAACAGCAGCAAATTGTCGATTACCTACAAGCTCAAGAATCTCAAGTGATGGGCTTTGTTCGCTCA
GAGCTTGCCAATGCCAGTGGCGGGCGATTCTATGGTTTGATCAATGCATTTCAACGCCTAGGGTTAGATATTGACGAAGC
ACGCGCCAATGCGCAGCAGCGTTATATAAAAGGTTCTGGCGATCAAATCAAAACATCGATTCTTCCTGAATCCAGCAGCT
TTATTGGCAGCGAGCGCTATCGTCTACTTCATAAGCGTTACCACAACTCTTATTTAGAACTGCTTAAGCGTTCTGATTTT
GACGACATTCTATTAGTCGACATTAACGGTAACATCGCTTATTCAGTATTTAAGCGCGATGACTACGGCACCAACTTGCT
GACAGGTAAGTACAAAGATGCAAACCTCGGCAAAACCTTTCAACGCCTGGAAAAAGACGTAAAAGACAAACGTAAATCCA
ACGAAGACTACACGCCGGTTATCGTTTCTGACTTTAAAGACGAAAATGGTAAACAGACCGCATGGTTAGGCGCACCTATC
GTTCAACAGGGCTACCTACACAGTTACGCCATGTTTAGACTGCCCATCAATGGTATTACTAAGCTTATTGCCGATCTCAA
CAAGAGTTCGAATATTCAAACCTTGCTTGTCGGCGATGATCATCTGCCACGTAGCCTTGCCCATTCGCAAGAGTCGATTA
ATCTGAGTTTAGATGTTGTTGATAAAGCTCTGGCAGGAGAAACGGCCGTTGGCACCTTCGACAACGCTCAAGATCAAGCG
ATCATCGCTGCATATACTCCAATTGAGCTCAAATATGCGACTTGGGCACTCGTCGTCGAGCTTCCTGAGAAAGAAGCATT
TGCTCGTATTCATCAGCTAGAAAAGATCTTTGTGATCGTGATGCTGACGGCGATTATTCTTGTATTTGTCGCATCCCATT
ATCTGTCTAACTTCATCACATCACCGTTGCTCAAGCTCACATGGGCAGCAGAGAAAGTCTCTGCGGGTGACCTTGATGAA
ACCATGATTAATACCGAACGAAAAGATGAGATAGGCCGCCTCGCGGTAAGCTTCGAAAGAATGCAGCGTTCGATTCGTGA
AAAGATGCTGCTCATTAAGAGTCAAAATGATGAGCTTGAGGACAACCTTAAGACCATTCAAAAACAAAATGAAGAGTTAC
AACTGGCCAACAAACTTAAAGATGAATTCTTAGCTACAACATCACACGAATTGAGAACGCCATTACATGGCATGGTAGGT
ATCGCTGAAGCGCTAATATCCGGCGCAAACGGTCCTATTCCTGCCAACCAGAAGTACCAGTTGGATATCATCATCAATAG
TGGCCAGAGATTGGCAACACTGGTCGATGATCTACTTGATTACCACAAAATGCGCTACGGCAGTTTAGACATAAATAAAT
CTGCTGTTGATTTATCTGCTGCTACCAGCTTGGTACTAGAATTGTCTCATCACCTGTTGGGCAATAAGCCAATCCGAATT
ATTAACCAAGTACCCTGTGATTTAGGGCTGGTTTCGTCCGATCCTCAACGACTGGAACAAGTGATGTATAACTTGGTCGG
CAATGCCATCAAGTACACATCAGAAGGTAAAATTGTTATCTCTGCAAGCGTTATCGACGACAACATTCGTGTACAAGTTG
TTGATACAGGCCAAGGCATACCTGCTGAATACCTAGAACATATCTTTGAACCGTTAATTCAAGCAGGACAAGACTCAAGT
AACTATCGCCAAGGTGCAGGGCTTGGGTTGTCCATAAGTCGTCAGCTGATTGAACTGATGGGCGGTTCACTGTACGTAAG
TAGTCAACCAATGCTTGGCACGACGTTCAGCTTTACCCTGCCTTTAGCCACCCAAGAAGAATTGGATAACTACAGTGATT
CAGGAAGCTATTCGCACTTCCAAGCGCCAGATTTAATTGATAACAGCCAACAAGAAAATAGTGTTATCAGTGAAGATCCA
AACGGTCCGTTACTGGTTATCGCCGACGATGAGCCAGTAAACTTACGCGTGCTAGACAGTTTCTTGAAATTGGAAGGTTA
TCGAGTACGCACCGCATGTGACGGCCCTGAAACCATTGAACTGATTGAGAAAGAGAAGCCAGAATTACTTCTGCTCGATA
TTATGATGCCGGGTATGAGTGGCTATCAGGTGTGTGAGGCGCTGCGTAAACAGTATGACCATGCACAATTGCCAATCATT
ATGCTCACGGCACTAAACCAAGCAGAAGACCGGGTTCGTGGCTTTGAAGCAGGAGCCAATGATTACTTGTCTAAACCGTT
CAACAAACAAGAACTGGCGGCGCGAATTACGGCTCACTTATCAGCAAGTAAAGCTGAGCAAAGGCGTCTTGAGAATGATC
AATTGCAACTGGAGCTTAAACACAGAGCCATGGTTGAAGCGAACTTACTAGAAACTCAAGGACGTTTGCTAGAGCAGTTA
GAATCAGCCCCTGAGGCGATCATCTGTATTCGTGATGACCAACGAATTCGATTTGCCAACGAAGCTGCAGCAAAACTATT
TAGGCGCGGGCAAGAGCAGCTTAAACGCTCTATGGCCGATGAGATCATTGCGCCTAAATATCTTAAGGTGGAACACGCTC
ACTACTGTGGTGATATTGACATCTATATAGACGACACTCGTCAGCGCATACCAAGTGATATCCTTAAGCTACCTGAAGGC
TCAGGGCTCGACACCATGTATATCTTTAATGTTGGTGGTGGGGTTAACTCAAACCGAGTCAATAACCTTGAAACGGCGGT
TGAGGCACTTTCAAGCTACGCCTTTGAGGGTGACAAAGATAAACTACAACAACTGAAAGAGCTTGGCGGTGAATTTACTC
GCCTTGCAGATAAAGCAACCGGTGAAGGTAAAAACAAACAAGAGCTGATGCGTGAAGTGCTGGTCGATGTCATGACTAAT
GCCATCATCTACTGGGAGTCTGTTACAGGGGAAACCAAGTTTGCCTTCGCAGAGAAGAGTGGCTTGTGGCGCGTCTACCT
AGACCGCAGTACCCTGCAAACTAGAACGCTAGACAAATATCTACGTGTAGAAACTCTACCGAAAACTCCTCGCTGGCGAA
CGGTACTGAGCTCTATCGAGTTTATACTTGAGCACTGTAAAGAACAGACACCTGAAAGAACTCATATTGAGACACTAAGG
GATAAGCTACAAAAACTACTGACCAGTTAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS domain (PAS_8) (880-914)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	75.908	100	0.759