Detailed information NTG0086093

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QUE55_RS22920
• Genome accession: NZ_AP027445
• Coordinates: 4335426..4336451 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC291 isolate EC291
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4330426..4341451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE55_RS22900 (MUTS14_44020)	metJ	4331487..4331804 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
QUE55_RS22905 (MUTS14_44030)	yiiX	4331988..4332596 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
QUE55_RS22910 (MUTS14_44040)	rpmE	4332657..4332869 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
QUE55_RS22915 (MUTS14_44050)	priA	4333072..4335270 (+)	2199	WP_048266991.1	primosomal protein N'	Machinery gene
QUE55_RS22920 (MUTS14_44060)	cytR	4335426..4336451 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QUE55_RS22925 (MUTS14_44070)	ftsN	4336543..4337502 (+)	960	WP_000068828.1	cell division protein FtsN	-
QUE55_RS22930 (MUTS14_44080)	hslV	4337595..4338125 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QUE55_RS22935 (MUTS14_44090)	hslU	4338135..4339466 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
QUE55_RS22940 (MUTS14_44100)	menA	4339533..4340459 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QUE55_RS22945 (MUTS14_44110)	rraA	4340552..4341037 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QUE55_RS22950 (MUTS14_44120)	zapB	4341122..4341367 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=86093 QUE55_RS22920 WP_000644904.1 4335426..4336451(+) (cytR) [Escherichia coli strain EC291 isolate EC291]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=86093 QUE55_RS22920 WP_000644904.1 4335426..4336451(+) (cytR) [Escherichia coli strain EC291 isolate EC291]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628