Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   Q4I20_RS04715 Genome accession   NZ_CP130597
Coordinates   925676..926470 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain NCIB_3610     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 920676..931470
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q4I20_RS04685 (Q4I20_04695) sxzA 921515..922546 (+) 1032 WP_003243057.1 FecCD family ABC transporter permease -
  Q4I20_RS04690 (Q4I20_04700) yfhB 922661..923542 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  Q4I20_RS04695 (Q4I20_04705) yfhC 923630..924214 (+) 585 WP_003243940.1 nitroreductase -
  Q4I20_RS04700 (Q4I20_04710) yfhD 924253..924444 (-) 192 WP_003233561.1 YfhD family protein -
  Q4I20_RS04705 (Q4I20_04715) yfhE 924511..924621 (-) 111 WP_003223230.1 YfhE family protein -
  Q4I20_RS04710 (Q4I20_04720) yfhF 924676..925587 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  Q4I20_RS04715 (Q4I20_04725) recX 925676..926470 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  Q4I20_RS04720 (Q4I20_04730) yfhH 926472..926786 (+) 315 WP_003244592.1 YfhH family protein -
  Q4I20_RS04725 (Q4I20_04735) yfhI 926929..928122 (+) 1194 WP_003243500.1 MFS transporter -
  Q4I20_RS04730 (Q4I20_04740) sspK 928155..928307 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  Q4I20_RS04735 (Q4I20_04745) yfhJ 928432..928701 (+) 270 WP_003243789.1 YfhJ family protein -
  Q4I20_RS04740 (Q4I20_04750) yfhK 928846..929364 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  Q4I20_RS04745 (Q4I20_04755) spdL 929449..929781 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  Q4I20_RS04750 (Q4I20_04760) ephM 929768..930628 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=860429 Q4I20_RS04715 WP_003243354.1 925676..926470(+) (recX) [Bacillus subtilis strain NCIB_3610]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=860429 Q4I20_RS04715 WP_003243354.1 925676..926470(+) (recX) [Bacillus subtilis strain NCIB_3610]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1