Detailed information NTG0086037

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: LC603172_RS15215
• Genome accession: NZ_AP024565
• Coordinates: 3047427..3048542 (-)
• Length: 371 a.a.
• NCBI ID: WP_061430331.1
• Uniprot ID: -
• Organism: Microcystis aeruginosa strain NIES-88
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3042427..3053542

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LC603172_RS15200 (MAN88_29480)	-	3043658..3045787 (-)	2130	WP_061430328.1	secretin N-terminal domain-containing protein	-
LC603172_RS15205 (MAN88_29490)	-	3045859..3046650 (-)	792	WP_061430329.1	hypothetical protein	-
LC603172_RS15210 (MAN88_29500)	-	3046647..3047417 (-)	771	WP_061430330.1	PilN domain-containing protein	-
LC603172_RS15215 (MAN88_29510)	pilM	3047427..3048542 (-)	1116	WP_061430331.1	type IV pilus assembly protein PilM	Machinery gene
LC603172_RS15220 (MAN88_29520)	ilvC	3049054..3050046 (+)	993	WP_061430332.1	ketol-acid reductoisomerase	-
LC603172_RS15225 (MAN88_29530)	-	3050195..3050983 (-)	789	WP_061430333.1	ECF transporter S component	-
LC603172_RS15230 (MAN88_29540)	-	3051074..3052261 (+)	1188	WP_061430334.1	RNA-guided endonuclease TnpB family protein	-
LC603172_RS15235 (MAN88_29550)	-	3052362..3053117 (-)	756	WP_061430335.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 41121.13 Da
• Isoelectric Point: 4.3747

>NTDB_id=86037 LC603172_RS15215 WP_061430331.1 3047427..3048542(-) (pilM) [Microcystis aeruginosa strain NIES-88]
MVSFFKKLLTKKTQGVGLEITPERINIAQIAKQGQNYKLVKCCSSDIPEGIFEEGKIVDSPALAELIQEVLKENKINSKR
VATGVPMRESIIRIIPIPSELDDQELRNLVLNHEASLYLPYPREEVDLDYQKLGYFQDEDGIEKVQVLLVATRREITDAY
METFQQAGLQVDVLEINSFALIRTIREHLRQFSSNEAAVIVDIEFDNTEIAIVVDGVPQFSRTVPIGTFQLQNALSRAMN
LPTSRSPEILLGMTIPIIAFDSLSTNTGTSGAPTNAGMTALMRVLGELTDELRRSINFYLNQSDEMEIVQLLLAGPGGGL
AQLDEYFTQRLSVPTMAIDPIASLNLDTTQEIPNTERPGLGTVLGLGLREV

Nucleotide

• Length: 1116 bp

>NTDB_id=86037 LC603172_RS15215 WP_061430331.1 3047427..3048542(-) (pilM) [Microcystis aeruginosa strain NIES-88]
ATGGTAAGTTTTTTTAAAAAGCTATTGACAAAAAAAACTCAAGGTGTTGGGTTAGAGATCACCCCGGAGCGTATTAACAT
AGCTCAGATCGCCAAACAGGGACAAAATTATAAATTAGTTAAATGTTGTTCGTCGGATATCCCGGAAGGCATCTTTGAGG
AGGGAAAAATCGTCGATTCCCCCGCTTTAGCGGAATTAATCCAAGAAGTCCTCAAGGAAAATAAAATTAACAGCAAACGA
GTCGCTACTGGTGTGCCGATGCGCGAGTCAATTATCCGGATTATCCCCATTCCCTCGGAATTGGACGATCAGGAATTGCG
AAATCTGGTCTTAAATCATGAGGCTAGTTTATACCTTCCCTATCCTCGCGAGGAAGTGGATCTCGACTACCAAAAACTAG
GCTACTTTCAGGATGAAGACGGGATCGAAAAAGTACAAGTATTATTAGTTGCTACTCGTCGGGAGATTACCGATGCCTAT
ATGGAAACCTTCCAACAGGCAGGATTACAGGTAGATGTGCTAGAAATTAATAGTTTTGCCCTAATTCGGACGATTCGCGA
GCATTTGCGACAGTTTAGTTCCAATGAAGCCGCCGTTATTGTTGATATAGAATTTGATAACACGGAAATTGCCATCGTGG
TGGACGGCGTTCCCCAATTTTCCCGCACTGTCCCCATCGGCACTTTCCAGCTACAAAATGCCCTCTCCAGGGCGATGAAT
TTGCCCACCTCCCGCAGTCCTGAGATTCTTTTGGGGATGACAATTCCGATTATTGCCTTTGATAGTCTTAGCACCAATAC
CGGCACTTCCGGGGCCCCTACTAACGCCGGGATGACGGCACTGATGCGCGTTTTAGGGGAATTAACCGATGAGTTACGGC
GATCGATTAATTTCTATCTTAACCAAAGTGATGAAATGGAAATCGTCCAGTTACTTTTAGCCGGTCCCGGGGGCGGTTTA
GCGCAACTAGACGAATACTTTACTCAACGTCTCAGCGTCCCCACCATGGCAATCGATCCGATCGCATCACTGAACTTAGA
TACAACTCAAGAGATTCCTAATACCGAAAGACCTGGATTAGGAACAGTTCTCGGTTTAGGATTACGGGAGGTATAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-241)

• Type IV pilus assembly protein PilM; (PilM_2) (285-369)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	75.135	99.73	0.749