Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   Q3V85_RS10480 Genome accession   NZ_CP130544
Coordinates   2120714..2121430 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain SA06-SX     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2115714..2126430
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V85_RS10450 - 2116209..2116913 (+) 705 WP_048665789.1 helix-turn-helix domain-containing protein -
  Q3V85_RS10455 - 2116928..2117761 (+) 834 WP_303262635.1 IS3 family transposase -
  Q3V85_RS10460 - 2118302..2118436 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  Q3V85_RS10465 agrB 2118672..2119241 (+) 570 WP_001105707.1 accessory gene regulator AgrB -
  Q3V85_RS10470 agrD 2119238..2119378 (+) 141 WP_001093929.1 cyclic lactone autoinducer peptide AgrD -
  Q3V85_RS10475 agrC 2119403..2120695 (+) 1293 WP_001554031.1 quorum-sensing sensor histidine kinase AgrC -
  Q3V85_RS10480 agrA 2120714..2121430 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  Q3V85_RS10485 - 2121502..2121609 (+) 108 WP_001790167.1 hypothetical protein -
  Q3V85_RS10490 - 2121797..2122756 (-) 960 WP_001253312.1 carbohydrate kinase -
  Q3V85_RS10495 - 2122753..2124237 (-) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  Q3V85_RS10500 - 2124386..2125336 (-) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=860110 Q3V85_RS10480 WP_000688492.1 2120714..2121430(+) (agrA) [Staphylococcus aureus strain SA06-SX]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=860110 Q3V85_RS10480 WP_000688492.1 2120714..2121430(+) (agrA) [Staphylococcus aureus strain SA06-SX]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1