Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   Q3V78_RS10930 Genome accession   NZ_CP130538
Coordinates   2153353..2154069 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain SA11-SX     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2148353..2159069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V78_RS10900 - 2148571..2149197 (+) 627 Protein_2115 nitroreductase family protein -
  Q3V78_RS10905 - 2149558..2150343 (+) 786 WP_000867953.1 carbon-nitrogen family hydrolase -
  Q3V78_RS10910 hld 2150941..2151021 (-) 81 WP_000046023.1 delta-hemolysin -
  Q3V78_RS10915 - 2151312..2151875 (+) 564 WP_001105716.1 accessory gene regulator AgrB -
  Q3V78_RS10920 agrD 2151877..2152017 (+) 141 WP_001094303.1 cyclic lactone autoinducer peptide AgrD -
  Q3V78_RS10925 agrC 2152042..2153334 (+) 1293 WP_001807128.1 quorum-sensing sensor histidine kinase AgrC -
  Q3V78_RS10930 agrA 2153353..2154069 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  Q3V78_RS10935 - 2154141..2154248 (+) 108 WP_031927410.1 hypothetical protein -
  Q3V78_RS10940 - 2154436..2155395 (-) 960 WP_001253302.1 carbohydrate kinase -
  Q3V78_RS10945 - 2155392..2156876 (-) 1485 WP_226452069.1 sucrose-6-phosphate hydrolase -
  Q3V78_RS10950 - 2157025..2157975 (-) 951 WP_000790321.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=859894 Q3V78_RS10930 WP_000688492.1 2153353..2154069(+) (agrA) [Staphylococcus aureus strain SA11-SX]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=859894 Q3V78_RS10930 WP_000688492.1 2153353..2154069(+) (agrA) [Staphylococcus aureus strain SA11-SX]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGATCCA
GTTGGTAACATTATATTTGTTACGAGTCACAGTGAACTTACCTATTTAACTTTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCAAAAGAGCGAATTGTCTATTTTAAAAACAAAGAACACTGCTATGCATCAGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1