Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | WBM82_RS13850 | Genome accession | NZ_CP147494 |
| Coordinates | 2604757..2605884 (+) | Length | 375 a.a. |
| NCBI ID | WP_015714307.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain YT1 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2599757..2610884
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WBM82_RS13820 (WBM82_13865) | - | 2600193..2600786 (-) | 594 | WP_015714302.1 | TetR/AcrR family transcriptional regulator | - |
| WBM82_RS13825 (WBM82_13870) | - | 2600944..2601939 (+) | 996 | WP_015714303.1 | acryloyl-CoA reductase | - |
| WBM82_RS13830 (WBM82_13875) | - | 2602222..2602362 (+) | 141 | WP_231940260.1 | DUF255 domain-containing protein | - |
| WBM82_RS13835 (WBM82_13880) | - | 2602470..2603309 (-) | 840 | WP_068947613.1 | collagen-like protein | - |
| WBM82_RS13840 (WBM82_13885) | - | 2603360..2603707 (-) | 348 | WP_015714305.1 | S-Ena type endospore appendage | - |
| WBM82_RS13845 (WBM82_13890) | - | 2603784..2604449 (-) | 666 | WP_015714306.1 | CotZ-related putative spore coat protein | - |
| WBM82_RS13850 (WBM82_13895) | rapC | 2604757..2605884 (+) | 1128 | WP_015714307.1 | response regulator aspartate phosphatase RapE | Regulator |
| WBM82_RS13855 (WBM82_13900) | phrE | 2605874..2606008 (+) | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| WBM82_RS13860 (WBM82_13905) | - | 2606118..2606277 (+) | 160 | Protein_2585 | hypothetical protein | - |
| WBM82_RS13865 (WBM82_13910) | yqcG | 2606647..2608242 (+) | 1596 | WP_015714309.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| WBM82_RS13870 (WBM82_13915) | yqcF | 2608257..2608835 (+) | 579 | WP_015714310.1 | type VII secretion system immunity protein YqcF | - |
| WBM82_RS13875 (WBM82_13920) | - | 2608953..2609099 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| WBM82_RS13880 (WBM82_13925) | - | 2609096..2609458 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| WBM82_RS13885 (WBM82_13930) | - | 2609474..2609953 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44640.47 Da Isoelectric Point: 7.5547
>NTDB_id=859552 WBM82_RS13850 WP_015714307.1 2604757..2605884(+) (rapC) [Bacillus subtilis strain YT1]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTMPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTMPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
Nucleotide
Download Length: 1128 bp
>NTDB_id=859552 WBM82_RS13850 WP_015714307.1 2604757..2605884(+) (rapC) [Bacillus subtilis strain YT1]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TAATGGCCTTCCGCCATAAAATCATGTTGGAATACACGATGCCATCCGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGGCATAAGAAGAAGCTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATATAACATCTATAAAAAACACGAGCTTTATTCTGTTCGGCGTATACAGTGCCATTTTGTCATTGCCGGTAACTA
TGATGACCTTGAAAATCATGAGAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGTTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCATTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATTAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TAATGGCCTTCCGCCATAAAATCATGTTGGAATACACGATGCCATCCGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATCGAAGGGCATAAGAAGAAGCTAGACAATATGCGGGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCCATTACATATTACAAAAAAGCTGAACGCAAAATTCCTACAATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAACTGTCTGAAGTCTATTATCATATGAAAATGACACACATTTCGATGCATTACGCTGAG
CTTTCATATAACATCTATAAAAAACACGAGCTTTATTCTGTTCGGCGTATACAGTGCCATTTTGTCATTGCCGGTAACTA
TGATGACCTTGAAAATCATGAGAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCATATCTATGCCACTGCGTTTTTCAATCTCGGCAATTGTTATCACAAAATGGACAACTTAAATAAGGCTGCTCGT
TACATCGAACAAGCCTTGGTTCAATACAGAAAAATTAACTCTGACGTACTTCCGCAAGCTTATCATGACCTAGCATTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATTAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGCGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAACGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.897 |
100 |
0.413 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
38.196 |
100 |
0.384 |