Detailed information NTG0859460

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: WBM82_RS02125
• Genome accession: NZ_CP147494
• Coordinates: 295463..296584 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain YT1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290463..301584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WBM82_RS02100 (WBM82_02105)	ycdA	290471..291535 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
WBM82_RS02105 (WBM82_02110)	-	291558..291689 (-)	132	WP_003246334.1	hypothetical protein	-
WBM82_RS02110 (WBM82_02115)	ycdB	291863..293281 (+)	1419	WP_129138107.1	YcdB/YcdC domain-containing protein	-
WBM82_RS02115 (WBM82_02120)	ycdC	293468..294829 (+)	1362	WP_129138221.1	YcdB/YcdC domain-containing protein	-
WBM82_RS02120 (WBM82_02125)	cwlK	294837..295340 (-)	504	WP_106074159.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
WBM82_RS02125 (WBM82_02130)	rapF	295463..296584 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
WBM82_RS02130 (WBM82_02135)	ycdF	296691..297467 (+)	777	WP_029726977.1	SDR family oxidoreductase	-
WBM82_RS02135 (WBM82_02140)	ycdG	297492..299177 (+)	1686	WP_217024604.1	alpha-glucosidase	-
WBM82_RS02140 (WBM82_02145)	znuA	299365..300324 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
WBM82_RS02145 (WBM82_02150)	znuC	300379..301074 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=859460 WBM82_RS02125 WP_015715201.1 295463..296584(+) (rapF) [Bacillus subtilis strain YT1]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=859460 WBM82_RS02125 WP_015715201.1 295463..296584(+) (rapF) [Bacillus subtilis strain YT1]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAGAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACTGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGTT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405