Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   Q3V64_RS03765 Genome accession   NZ_CP130517
Coordinates   761914..762630 (-) Length   238 a.a.
NCBI ID   WP_000688498.1    Uniprot ID   Q2VG52
Organism   Staphylococcus aureus strain SA26-SX     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 756914..767630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V64_RS03745 - 757998..758948 (+) 951 WP_031588340.1 LacI family DNA-binding transcriptional regulator -
  Q3V64_RS03750 - 759097..760581 (+) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  Q3V64_RS03755 - 760578..761537 (+) 960 WP_001253314.1 carbohydrate kinase -
  Q3V64_RS03760 - 761725..761834 (-) 110 Protein_737 hypothetical protein -
  Q3V64_RS03765 agrA 761914..762630 (-) 717 WP_000688498.1 quorum-sensing response regulator AgrA Regulator
  Q3V64_RS03770 agrC 762649..763911 (-) 1263 WP_031887801.1 quorum-sensing sensor histidine kinase AgrC -
  Q3V64_RS03775 - 763974..765144 (+) 1171 Protein_740 IS256-like element IS256 family transposase -
  Q3V64_RS03780 agrD 765292..765435 (-) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  Q3V64_RS03785 - 765438..766001 (-) 564 WP_001105696.1 accessory gene regulator AgrB -
  Q3V64_RS03790 - 766237..766371 (+) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27933.91 Da        Isoelectric Point: 6.0927

>NTDB_id=859220 Q3V64_RS03765 WP_000688498.1 761914..762630(-) (agrA) [Staphylococcus aureus strain SA26-SX]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSRDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=859220 Q3V64_RS03765 WP_000688498.1 761914..762630(-) (agrA) [Staphylococcus aureus strain SA26-SX]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAGAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTTAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-237)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2VG52

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

99.58

100

0.996