Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   Q3V79_RS10710 Genome accession   NZ_CP130513
Coordinates   2127929..2128645 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain SA29-SX     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2122929..2133645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3V79_RS10680 - 2123145..2123771 (+) 627 WP_000522384.1 nitroreductase family protein -
  Q3V79_RS10685 - 2124132..2124917 (+) 786 WP_000867941.1 carbon-nitrogen family hydrolase -
  Q3V79_RS10690 - 2125516..2125650 (-) 135 WP_001823225.1 delta-lysin family phenol-soluble modulin -
  Q3V79_RS10695 - 2125886..2126449 (+) 564 WP_001105705.1 accessory gene regulator AgrB -
  Q3V79_RS10700 agrD 2126453..2126593 (+) 141 WP_000735197.1 cyclic lactone autoinducer peptide AgrD -
  Q3V79_RS10705 agrC 2126618..2127910 (+) 1293 WP_000387809.1 quorum-sensing sensor histidine kinase AgrC -
  Q3V79_RS10710 agrA 2127929..2128645 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  Q3V79_RS10715 - 2128717..2128826 (+) 110 Protein_2078 hypothetical protein -
  Q3V79_RS10720 - 2129014..2129973 (-) 960 WP_001253302.1 carbohydrate kinase -
  Q3V79_RS10725 - 2129970..2131454 (-) 1485 WP_000141427.1 sucrose-6-phosphate hydrolase -
  Q3V79_RS10730 - 2131603..2132553 (-) 951 WP_000790329.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=859122 Q3V79_RS10710 WP_000688492.1 2127929..2128645(+) (agrA) [Staphylococcus aureus strain SA29-SX]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=859122 Q3V79_RS10710 WP_000688492.1 2127929..2128645(+) (agrA) [Staphylococcus aureus strain SA29-SX]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1