Detailed information NTG0858689

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Q2T91_RS24655
• Genome accession: NZ_CP130500
• Coordinates: 3524069..3525208 (+)
• Length: 379 a.a.
• NCBI ID: WP_020831131.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain DG-3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3519069..3530208

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q2T91_RS24640 (Q2T91_24630)	-	3519692..3521021 (-)	1330	Protein_3249	IS4 family transposase	-
Q2T91_RS24645 (Q2T91_24635)	-	3521160..3522503 (-)	1344	WP_011000351.1	M16 family metallopeptidase	-
Q2T91_RS24650 (Q2T91_24640)	-	3522503..3524008 (-)	1506	WP_247394302.1	M16 family metallopeptidase	-
Q2T91_RS24655 (Q2T91_24645)	pilA	3524069..3525208 (+)	1140	WP_020831131.1	signal recognition particle-docking protein FtsY	Machinery gene
Q2T91_RS24660 (Q2T91_24650)	-	3525205..3525843 (-)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
Q2T91_RS24665 (Q2T91_24655)	maiA	3525840..3526490 (-)	651	WP_019717483.1	maleylacetoacetate isomerase	-
Q2T91_RS24670 (Q2T91_24660)	-	3526494..3527195 (-)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
Q2T91_RS24675 (Q2T91_24665)	-	3527343..3527969 (+)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
Q2T91_RS24680 (Q2T91_24670)	-	3528246..3529508 (+)	1263	WP_028860158.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40157.41 Da
• Isoelectric Point: 5.8101

>NTDB_id=858689 Q2T91_RS24655 WP_020831131.1 3524069..3525208(+) (pilA) [Ralstonia pseudosolanacearum strain DG-3]
MFSFWKKRKAEPQPAAELAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=858689 Q2T91_RS24655 WP_020831131.1 3524069..3525208(+) (pilA) [Ralstonia pseudosolanacearum strain DG-3]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACTGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCGCGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGTGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAAGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTGCCGGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.573