Detailed information NTG0858664

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: Q2310_RS25680
• Genome accession: NZ_CP130491
• Coordinates: 4992530..4993879 (-)
• Length: 449 a.a.
• NCBI ID: WP_048534568.1
• Uniprot ID: -
• Organism: Bacillus cereus strain T
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4987530..4998879

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q2310_RS25660 (Q2310_25630)	secA	4987855..4990362 (-)	2508	WP_000579387.1	preprotein translocase subunit SecA	-
Q2310_RS25665 (Q2310_25635)	hpf	4990637..4991179 (-)	543	WP_000671185.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
Q2310_RS25670 (Q2310_25640)	cspC	4991502..4991699 (-)	198	WP_001990088.1	cold shock protein CspC	-
Q2310_RS25675 (Q2310_25645)	-	4991826..4992530 (-)	705	WP_033666421.1	ComF family protein	-
Q2310_RS25680 (Q2310_25650)	comFA	4992530..4993879 (-)	1350	WP_048534568.1	ATP-dependent helicase ComFA	Machinery gene
Q2310_RS25685 (Q2310_25655)	-	4994007..4995419 (-)	1413	WP_044306533.1	NlpC/P60 family protein	-
Q2310_RS25690 (Q2310_25660)	-	4995568..4995882 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
Q2310_RS25695 (Q2310_25665)	-	4996055..4996897 (-)	843	WP_000684725.1	DegV family protein	-
Q2310_RS25700 (Q2310_25670)	-	4997134..4997769 (+)	636	WP_000926669.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51089.92 Da
• Isoelectric Point: 10.0106

>NTDB_id=858664 Q2310_RS25680 WP_048534568.1 4992530..4993879(-) (comFA) [Bacillus cereus strain T]
MVAGKQLLLEELSSDLQRKLNDLKKKGEIVCVQGVKKKNSKYMCQRCGNVDRRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIAERKREKNSNLLQWNGTLSTGQNLAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGINEALQKGERVCIAT
PRTDVVLELAPRLQEVFPYIKVAALYGGSVDKEKDAVLVVATTHQLLRYYRAFHVIVVDEIDAFPYCADQMLQYAVKQAM
KEKAARIYLTATPDETWKRKFRKGEQKGVIVSGRYHRHPLPVPLFCWCGNWKKSLNRERIPRVLLQWLKMHLNKKYPVFL
FVPHVRYIEEISSLLKSLHNKVEGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEAPYGEVIYFHYGKTEAMVRAKKHIQGMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=858664 Q2310_RS25680 WP_048534568.1 4992530..4993879(-) (comFA) [Bacillus cereus strain T]
ATGGTAGCGGGGAAACAGTTGCTATTAGAAGAACTTTCTTCAGATTTACAGAGGAAATTAAACGATTTGAAAAAGAAGGG
AGAGATTGTATGTGTACAAGGTGTAAAAAAGAAGAATTCTAAATATATGTGCCAACGCTGTGGAAATGTAGATCGGCGGC
TATTTGCGTCGTTTTTATGTAAAAGGTGCAGTAAAGTGTGCACATATTGCCGGAAGTGTATAACGATGGGGAGAGTAAGT
GAATGTGCTGTACTTGTTCGCGGGATTGCTGAAAGAAAGAGAGAAAAGAATTCAAATTTGTTACAGTGGAACGGGACGTT
GTCTACTGGCCAGAATTTGGCGGCGCAAGGAGTTATAGAGGCTATTAAGCAAAAAGAATCATTTTTTATTTGGGCTGTAT
GCGGGGCTGGGAAAACAGAGATGTTGTTTTACGGTATTAACGAAGCGCTTCAAAAAGGAGAAAGAGTTTGTATCGCAACG
CCAAGAACGGATGTTGTTTTGGAATTAGCACCGAGATTACAAGAAGTATTTCCATATATAAAGGTAGCGGCTTTATATGG
AGGGAGTGTAGATAAAGAAAAAGATGCAGTATTAGTCGTTGCGACCACGCATCAATTATTACGTTATTATAGGGCGTTTC
ATGTCATAGTTGTAGATGAGATAGATGCTTTTCCATATTGTGCAGATCAAATGTTACAGTACGCGGTAAAACAAGCGATG
AAAGAAAAAGCGGCGCGTATTTATTTAACTGCGACTCCAGATGAAACGTGGAAGCGAAAATTTAGAAAAGGTGAACAAAA
AGGTGTTATTGTTTCTGGACGATATCACCGTCATCCGTTGCCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTCAACCGTGAAAGAATTCCTCGAGTTTTACTACAATGGTTAAAGATGCACTTAAACAAAAAGTATCCTGTTTTTTTA
TTCGTTCCCCATGTACGATATATAGAAGAAATAAGCTCGTTATTGAAATCATTGCATAATAAAGTTGAAGGGGTACATGC
AGAAGATCCGATGAGAAAAGAGAAAGTCGCAGCGTTCAGAAAGGGAGAAATCCCATTATTAGTTACAACGACAATTTTAG
AGCGAGGCGTAACGGTGAAAAATTTGCAAGTTGCAGTTTTAGGGGCGGAAGAAGAAATATTTTCAGAAAGTGCGCTCGTA
CAAATTGCGGGCCGAGCAGGGCGGAGCTTTGAAGCACCGTATGGAGAGGTCATTTATTTTCACTATGGCAAGACAGAGGC
GATGGTGCGCGCGAAAAAACATATTCAAGGTATGAATAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (107-254)

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.871	93.096	0.492