Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   Q3A90_RS25920 Genome accession   NZ_CP130477
Coordinates   5002024..5002218 (-) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain S1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4997024..5007218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3A90_RS25895 (Q3A90_25895) - 4997190..4998212 (-) 1023 WP_098113540.1 ABC transporter ATP-binding protein -
  Q3A90_RS25900 (Q3A90_25900) - 4998439..4999212 (-) 774 WP_221780423.1 DUF2268 domain-containing protein -
  Q3A90_RS25905 (Q3A90_25905) fabF 4999319..5000560 (-) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  Q3A90_RS25910 (Q3A90_25910) - 5000600..5001538 (-) 939 WP_028407464.1 beta-ketoacyl-ACP synthase III -
  Q3A90_RS25915 (Q3A90_25915) - 5001795..5001995 (+) 201 WP_164797076.1 hypothetical protein -
  Q3A90_RS25920 (Q3A90_25920) comZ 5002024..5002218 (-) 195 WP_013081746.1 ComZ family protein Regulator
  Q3A90_RS25925 (Q3A90_25925) - 5002296..5003180 (-) 885 WP_115653061.1 NAD(P)-dependent oxidoreductase -
  Q3A90_RS25930 (Q3A90_25930) - 5003363..5004103 (-) 741 WP_013055401.1 hypothetical protein -
  Q3A90_RS25935 (Q3A90_25935) - 5004313..5004501 (+) 189 WP_013055400.1 YjzD family protein -
  Q3A90_RS25940 (Q3A90_25940) - 5004705..5005589 (+) 885 WP_290097802.1 NAD(P)-dependent oxidoreductase -
  Q3A90_RS25945 (Q3A90_25945) galT 5005632..5007155 (-) 1524 WP_302892708.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=858555 Q3A90_RS25920 WP_013081746.1 5002024..5002218(-) (comZ) [Priestia megaterium strain S1]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=858555 Q3A90_RS25920 WP_013081746.1 5002024..5002218(-) (comZ) [Priestia megaterium strain S1]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACCTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGTTATCAATGGAACACGTACAGCCGGTATTGACATTACTAACAAAAGTAATGAACGACGCTTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563