Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   Q3A90_RS12805 Genome accession   NZ_CP130477
Coordinates   2378075..2379025 (+) Length   316 a.a.
NCBI ID   WP_013057891.1    Uniprot ID   A0A0B6AV51
Organism   Priestia megaterium strain S1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2373075..2384025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3A90_RS12775 (Q3A90_12775) lepB 2373242..2373802 (+) 561 WP_060745332.1 signal peptidase I -
  Q3A90_RS12780 (Q3A90_12780) - 2374036..2374599 (+) 564 WP_115654347.1 NAD(P)H-dependent oxidoreductase -
  Q3A90_RS12785 (Q3A90_12785) - 2375163..2375348 (+) 186 WP_115654346.1 hypothetical protein -
  Q3A90_RS12790 (Q3A90_12790) - 2375838..2376002 (+) 165 WP_013057894.1 hypothetical protein -
  Q3A90_RS12795 (Q3A90_12795) - 2376084..2376338 (-) 255 WP_013057893.1 hypothetical protein -
  Q3A90_RS12800 (Q3A90_12800) - 2376701..2377507 (+) 807 WP_013057892.1 cell wall hydrolase -
  Q3A90_RS12805 (Q3A90_12805) ceuB 2378075..2379025 (+) 951 WP_013057891.1 ABC transporter permease Machinery gene
  Q3A90_RS12810 (Q3A90_12810) - 2379018..2379965 (+) 948 WP_221781275.1 iron chelate uptake ABC transporter family permease subunit -
  Q3A90_RS12815 (Q3A90_12815) - 2379959..2380717 (+) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  Q3A90_RS12820 (Q3A90_12820) - 2380741..2381697 (+) 957 WP_302893045.1 siderophore ABC transporter substrate-binding protein -
  Q3A90_RS12825 (Q3A90_12825) - 2381740..2382006 (+) 267 Protein_2414 manganese catalase family protein -
  Q3A90_RS12830 (Q3A90_12830) - 2382262..2382402 (+) 141 WP_302893046.1 hypothetical protein -
  Q3A90_RS12835 (Q3A90_12835) - 2382871..2383950 (-) 1080 WP_302893047.1 PrsW family intramembrane metalloprotease -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 35037.32 Da        Isoelectric Point: 9.9188

>NTDB_id=858539 Q3A90_RS12805 WP_013057891.1 2378075..2379025(+) (ceuB) [Priestia megaterium strain S1]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GTMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=858539 Q3A90_RS12805 WP_013057891.1 2378075..2379025(+) (ceuB) [Priestia megaterium strain S1]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTTAGTCGTTTTCCTAGGCTTTTGAGCATTATTA
TGGCGGGAATGAGCCTTAGTATTTGTGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAACGATGGACTGGGCAAGGCTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAGATGAG
CATTGCGTTCATTTTCTCACTTGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGAAGTATCGTAAGTTCCTTAGCTACCTTCATTGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAAGGGAGATATGAACTTTTATACCTGAGTATACC
GCTCTTAATAATCGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACGTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTCTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGCAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGTTAATGGTAGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains


Predicted by InterproScan.

(10-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B6AV51

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.318

95.57

0.5