Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   Q3O39_RS17650 Genome accession   NZ_CP130475
Coordinates   3576025..3576189 (-) Length   54 a.a.
NCBI ID   WP_269194677.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM126726     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3571025..3581189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3O39_RS17650 (Q3O39_17650) comS 3576025..3576189 (-) 165 WP_269194677.1 competence protein ComS Regulator
  Q3O39_RS17655 (Q3O39_17655) srfAB 3576254..3579298 (-) 3045 Protein_3464 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6211.19 Da        Isoelectric Point: 11.7559

>NTDB_id=858492 Q3O39_RS17650 WP_269194677.1 3576025..3576189(-) (comS) [Bacillus velezensis strain SRCM126726]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=858492 Q3O39_RS17650 WP_269194677.1 3576025..3576189(-) (comS) [Bacillus velezensis strain SRCM126726]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5