Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   Q3O83_RS15195 Genome accession   NZ_CP130445
Coordinates   3070999..3071985 (-) Length   328 a.a.
NCBI ID   WP_269321599.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain C6.7     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3065999..3076985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q3O83_RS15160 (Q3O83_15160) - 3066255..3066731 (+) 477 WP_003152059.1 Na+/H+ antiporter subunit E -
  Q3O83_RS15165 (Q3O83_15165) - 3066731..3067015 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  Q3O83_RS15170 (Q3O83_15170) mnhG 3066999..3067373 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  Q3O83_RS15175 (Q3O83_15175) - 3067413..3067796 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  Q3O83_RS15180 (Q3O83_15180) comA 3067818..3068462 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  Q3O83_RS15185 (Q3O83_15185) - 3068543..3070846 (-) 2304 Protein_2929 histidine kinase -
  Q3O83_RS15190 (Q3O83_15190) comX 3070866..3071045 (-) 180 WP_306383677.1 competence pheromone ComX -
  Q3O83_RS15195 (Q3O83_15195) comQ 3070999..3071985 (-) 987 WP_269321599.1 class 1 isoprenoid biosynthesis enzyme Regulator
  Q3O83_RS15200 (Q3O83_15200) degQ 3072116..3072256 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  Q3O83_RS15205 (Q3O83_15205) - 3072722..3073063 (+) 342 WP_003152040.1 hypothetical protein -
  Q3O83_RS15210 (Q3O83_15210) - 3073070..3074290 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  Q3O83_RS15215 (Q3O83_15215) - 3074420..3075886 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -
  Q3O83_RS15220 (Q3O83_15220) - 3075904..3076455 (-) 552 WP_003152033.1 cysteine hydrolase family protein -
  Q3O83_RS15225 (Q3O83_15225) - 3076552..3076950 (-) 399 WP_003152031.1 YueI family protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37795.36 Da        Isoelectric Point: 5.6937

>NTDB_id=858232 Q3O83_RS15195 WP_269321599.1 3070999..3071985(-) (comQ) [Bacillus amyloliquefaciens strain C6.7]
MKTIIEQMCLDANQIKNRMKSIIERNIFNEHLMQLLLRFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPETEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LRIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCGTEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=858232 Q3O83_RS15195 WP_269321599.1 3070999..3071985(-) (comQ) [Bacillus amyloliquefaciens strain C6.7]
GTGAAGACAATTATTGAGCAAATGTGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTTCGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGACCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAGAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
GTCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGTGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTCGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATTCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGGAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-245)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.246

88.11

0.54