Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   Q2U85_RS20910 Genome accession   NZ_CP130335
Coordinates   4091910..4092368 (+) Length   152 a.a.
NCBI ID   WP_000804862.1    Uniprot ID   -
Organism   Bacillus cereus strain DW444     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4086910..4097368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2U85_RS20895 (Q2U85_20895) - 4087580..4087816 (+) 237 WP_000283738.1 hypothetical protein -
  Q2U85_RS20900 (Q2U85_20900) - 4087977..4090085 (-) 2109 WP_098022486.1 polyphosphate kinase -
  Q2U85_RS20905 (Q2U85_20905) - 4090194..4091768 (-) 1575 WP_153587764.1 Ppx/GppA family phosphatase -
  Q2U85_RS20910 (Q2U85_20910) kre 4091910..4092368 (+) 459 WP_000804862.1 YkyB family protein Regulator
  Q2U85_RS20915 (Q2U85_20915) - 4092400..4093062 (-) 663 WP_000922485.1 YkyA family protein -
  Q2U85_RS20920 (Q2U85_20920) - 4093677..4094330 (-) 654 WP_153587765.1 diguanylate cyclase -
  Q2U85_RS20925 (Q2U85_20925) - 4094494..4094727 (+) 234 WP_000939448.1 SPP1 phage holin family protein -
  Q2U85_RS20930 (Q2U85_20930) - 4094759..4095259 (-) 501 WP_098364861.1 hypothetical protein -
  Q2U85_RS20935 (Q2U85_20935) - 4095673..4097214 (+) 1542 WP_000449901.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=858003 Q2U85_RS20910 WP_000804862.1 4091910..4092368(+) (kre) [Bacillus cereus strain DW444]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTIQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=858003 Q2U85_RS20910 WP_000804862.1 4091910..4092368(+) (kre) [Bacillus cereus strain DW444]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTACATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACAATTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAACCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

63.793

76.316

0.487