Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   Q2U85_RS09915 Genome accession   NZ_CP130335
Coordinates   1876265..1878121 (+) Length   618 a.a.
NCBI ID   WP_086407209.1    Uniprot ID   A0A9X8M1R6
Organism   Bacillus cereus strain DW444     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1871265..1883121
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2U85_RS09895 (Q2U85_09895) ltrA 1871686..1872993 (+) 1308 WP_097998606.1 group II intron reverse transcriptase/maturase -
  Q2U85_RS09900 (Q2U85_09900) - 1873137..1873523 (+) 387 Protein_1864 IS4 family transposase -
  Q2U85_RS09905 (Q2U85_09905) - 1873964..1874374 (+) 411 WP_098604844.1 MarR family winged helix-turn-helix transcriptional regulator -
  Q2U85_RS09910 (Q2U85_09910) rcrP 1874509..1876278 (+) 1770 WP_098876597.1 ABC transporter ATP-binding protein Regulator
  Q2U85_RS09915 (Q2U85_09915) rcrQ 1876265..1878121 (+) 1857 WP_086407209.1 ABC transporter ATP-binding protein Regulator
  Q2U85_RS09920 (Q2U85_09920) - 1878635..1879255 (+) 621 WP_086407210.1 TetR/AcrR family transcriptional regulator -
  Q2U85_RS09925 (Q2U85_09925) - 1879295..1879906 (+) 612 WP_033667507.1 GTP pyrophosphokinase family protein -
  Q2U85_RS09930 (Q2U85_09930) - 1880030..1880863 (+) 834 WP_098876596.1 YitT family protein -
  Q2U85_RS09935 (Q2U85_09935) - 1881140..1882345 (+) 1206 WP_000048907.1 macrolide family glycosyltransferase -

Sequence

Protein


Download         Length: 618 a.a.        Molecular weight: 68595.46 Da        Isoelectric Point: 6.7265

>NTDB_id=857994 Q2U85_RS09915 WP_086407209.1 1876265..1878121(+) (rcrQ) [Bacillus cereus strain DW444]
MAKNDYTIGDHEKNSKNGRQMGGGLSPMGGRAQGQKVNNFKKTIQQLISYCKSYVPIVIFALILAFVGSAFNVYGPDKLS
EMTDLIQEGIRGDIDLGAIKNIGIILVVLYGLGLVFNYIQGFIMATVTQKITKKMRTELSQKMNRIPLSYFDKMSYGNIL
SRVTNDVDTIGQTLNNSLGQLVTAIATFVGALIMMFYTNWIMAITGIVATLIGFILMTLIMKRSQKYFVQQQAELGKING
HIEEMYAGHHIVKAYNGEKEAKEVFHTINDRLFDNAWKSQFMSGIMMPIMQFIGNFGYVAVCIVGALLVTNGVITIGTIV
AFMVYIRLFTQPLSQLAQAATNLQSTAAASERVFEFLEEEELSNESEKTLRLDNVKGDVEFKHVKFGYDKDRLIIKDFSA
KVNAGQKVAIVGPTGAGKTTLVNLLMRFYELNSGEITIDGVPINQLTREHVHDLFCMVLQDTWLFEGTIRENIVYSKENV
SDEEIIATCKAVGLHNTIKNLSNGYDTLLNDKANLSAGQKQLITIARAMIENAPLLILDEATSSVDTRTELLIQKAMDRL
TVGKTSFVIAHRLSTIKNADLILVMKEGDILETGNHEELLAKGGFYADLYNSQFESVS

Nucleotide


Download         Length: 1857 bp        

>NTDB_id=857994 Q2U85_RS09915 WP_086407209.1 1876265..1878121(+) (rcrQ) [Bacillus cereus strain DW444]
ATGGCCAAAAATGATTATACCATTGGAGATCATGAAAAAAACTCAAAAAATGGGAGACAGATGGGCGGAGGGCTTAGTCC
AATGGGTGGCAGGGCCCAAGGGCAAAAAGTAAACAATTTTAAAAAAACGATTCAACAGCTGATTTCCTACTGTAAGTCTT
ATGTACCCATTGTTATTTTTGCCTTAATATTAGCTTTTGTGGGTTCTGCATTTAATGTATATGGCCCAGATAAATTAAGT
GAAATGACAGACCTTATCCAAGAAGGGATTAGGGGTGACATTGATTTAGGTGCAATCAAAAATATTGGAATCATTTTAGT
GGTTCTCTACGGATTAGGCTTGGTATTTAATTATATACAAGGTTTTATAATGGCAACGGTAACACAAAAAATCACAAAAA
AAATGCGTACAGAATTATCGCAAAAAATGAATCGAATCCCTTTAAGTTACTTTGATAAAATGAGTTATGGAAATATATTA
AGCCGTGTAACAAATGATGTTGATACAATTGGCCAAACGCTAAATAATAGCCTAGGACAATTAGTAACGGCAATCGCAAC
TTTTGTTGGTGCATTAATAATGATGTTCTATACAAACTGGATTATGGCTATAACAGGAATTGTTGCAACCTTAATTGGAT
TTATTTTAATGACATTGATTATGAAGCGTTCTCAAAAATACTTTGTACAACAGCAGGCTGAACTAGGGAAAATCAATGGA
CATATTGAAGAAATGTATGCAGGTCACCATATCGTAAAAGCATATAACGGCGAAAAGGAAGCAAAAGAAGTGTTCCATAC
AATCAATGATCGTCTTTTTGATAATGCTTGGAAATCACAGTTTATGTCTGGGATTATGATGCCTATCATGCAGTTTATCG
GGAACTTTGGGTATGTAGCAGTTTGTATTGTTGGTGCATTACTTGTGACAAATGGTGTAATTACAATTGGAACAATCGTT
GCCTTTATGGTCTATATTCGTTTGTTCACACAGCCATTATCACAATTAGCACAAGCTGCAACGAATCTGCAATCTACAGC
AGCAGCAAGTGAACGTGTATTTGAATTTTTAGAAGAAGAAGAATTATCAAATGAAAGTGAAAAAACACTGAGATTAGATA
ATGTCAAAGGAGATGTGGAATTTAAGCATGTTAAATTTGGCTATGATAAAGATCGTCTTATCATTAAAGACTTCTCTGCT
AAAGTGAATGCAGGACAAAAAGTAGCTATTGTAGGTCCAACGGGTGCTGGAAAAACGACATTAGTAAATTTATTAATGCG
ATTTTATGAACTGAACAGTGGAGAAATTACTATTGATGGTGTTCCTATAAATCAATTAACTCGTGAACATGTGCATGATC
TATTCTGTATGGTACTTCAGGATACATGGCTATTCGAAGGGACGATTCGCGAAAATATTGTCTATTCAAAGGAAAATGTT
TCAGATGAAGAAATTATAGCAACATGTAAAGCAGTTGGGCTGCATAATACGATTAAAAACTTATCTAACGGTTATGATAC
CTTATTAAATGATAAAGCGAATTTATCAGCTGGACAAAAACAATTAATTACGATTGCCCGTGCGATGATTGAAAATGCCC
CATTATTAATTCTAGATGAGGCTACGAGCTCAGTTGATACACGTACGGAATTATTAATTCAAAAAGCAATGGATCGTTTA
ACAGTTGGGAAAACATCCTTTGTCATTGCACACCGTCTTTCGACGATAAAAAATGCTGACTTGATCTTAGTGATGAAAGA
GGGAGACATTTTAGAAACAGGAAACCATGAGGAGTTACTAGCAAAAGGTGGATTCTATGCGGATCTGTATAATAGTCAAT
TTGAATCAGTCTCTTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(58-333)

ABC transporter (ABC_tran)

(396-543)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

56.326

93.366

0.526