Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   Q2U85_RS09910 Genome accession   NZ_CP130335
Coordinates   1874509..1876278 (+) Length   589 a.a.
NCBI ID   WP_098876597.1    Uniprot ID   -
Organism   Bacillus cereus strain DW444     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1869509..1881278
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2U85_RS09890 (Q2U85_09890) - 1870124..1871167 (+) 1044 Protein_1862 IS4 family transposase -
  Q2U85_RS09895 (Q2U85_09895) ltrA 1871686..1872993 (+) 1308 WP_097998606.1 group II intron reverse transcriptase/maturase -
  Q2U85_RS09900 (Q2U85_09900) - 1873137..1873523 (+) 387 Protein_1864 IS4 family transposase -
  Q2U85_RS09905 (Q2U85_09905) - 1873964..1874374 (+) 411 WP_098604844.1 MarR family winged helix-turn-helix transcriptional regulator -
  Q2U85_RS09910 (Q2U85_09910) rcrP 1874509..1876278 (+) 1770 WP_098876597.1 ABC transporter ATP-binding protein Regulator
  Q2U85_RS09915 (Q2U85_09915) rcrQ 1876265..1878121 (+) 1857 WP_086407209.1 ABC transporter ATP-binding protein Regulator
  Q2U85_RS09920 (Q2U85_09920) - 1878635..1879255 (+) 621 WP_086407210.1 TetR/AcrR family transcriptional regulator -
  Q2U85_RS09925 (Q2U85_09925) - 1879295..1879906 (+) 612 WP_033667507.1 GTP pyrophosphokinase family protein -
  Q2U85_RS09930 (Q2U85_09930) - 1880030..1880863 (+) 834 WP_098876596.1 YitT family protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65411.09 Da        Isoelectric Point: 6.8752

>NTDB_id=857993 Q2U85_RS09910 WP_098876597.1 1874509..1876278(+) (rcrP) [Bacillus cereus strain DW444]
MLKIFKYLKRNEWILVLLSIVFITVQVWLDLKLPDYMAEITTLIQMEGTNFSQIIEPGAYMLLCAVGSMVTAVIVGYFAA
KVAAGLSKRLRGLVFDKTLSFSLEEINRFSIASLITRSTNDVTQIQFIVAMGLQIIVKAPILAVWAIMKISGKSWQLTTA
TGIAVVVLCMMLAVIILFAIPKFKIIQTLTDNLNRVTRENLTGMRVVRAYNAKDYEENKFEKANMELTKTNLFANRLMAI
IGPGMTAIMSGLSVAIYWIGAYLINEAQMVNRITIFSDIVVFSSYAMQVVMAFMMVSMIFIMLPRATVSAKRIMEVLETE
AKITDGTVTEGKPGIVGEIEFRNVSFKYPDSENHILRNISFTAKKGETVAFIGSTGSGKTSLVNLIPRFNDVSEGEVLVD
GVNVKNYRQETLHDKIGYVSQSSVLFSGTVTSNVSYGESGHMDSSLNAVKEALEIAQGKEFVEKLEGQYEAQISQGGTNV
SGGQKQRISIARAIYRKPEIYIFDDSFSALDYKTDRVLRSALRKETKDATTLIVAQRIGTIKDADRIIVLEEGEVVGNGT
HEQLMDSCETYQEIAYSQLSKEELTDGQK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=857993 Q2U85_RS09910 WP_098876597.1 1874509..1876278(+) (rcrP) [Bacillus cereus strain DW444]
ATGTTGAAAATATTTAAATATTTGAAAAGGAACGAATGGATACTTGTTCTATTAAGTATAGTATTCATTACGGTACAGGT
TTGGCTAGATTTAAAGCTACCGGACTATATGGCTGAAATCACGACATTAATCCAAATGGAAGGTACGAACTTTTCTCAAA
TTATTGAACCTGGAGCATATATGCTACTCTGTGCAGTAGGAAGTATGGTTACTGCCGTTATTGTAGGATACTTTGCTGCT
AAGGTTGCAGCGGGATTATCAAAACGTCTACGCGGATTAGTTTTTGATAAAACTTTATCTTTTTCGTTGGAAGAAATTAA
TCGTTTTTCGATAGCAAGTTTGATTACTCGTTCAACTAATGATGTTACGCAAATTCAATTTATTGTGGCAATGGGATTAC
AGATAATTGTAAAAGCGCCAATTCTAGCTGTTTGGGCAATCATGAAAATTTCAGGGAAAAGCTGGCAATTGACAACAGCG
ACGGGTATAGCAGTTGTCGTTTTATGCATGATGTTAGCTGTGATTATTCTATTTGCAATACCAAAGTTCAAAATCATTCA
AACTCTTACTGATAATTTAAACCGTGTAACTCGTGAGAACTTGACAGGGATGCGCGTTGTACGTGCTTATAACGCTAAGG
ACTATGAAGAAAATAAATTTGAAAAAGCTAATATGGAATTAACAAAAACAAATCTTTTTGCAAATCGTTTAATGGCAATT
ATTGGACCAGGGATGACTGCAATTATGTCCGGTTTAAGTGTTGCGATTTATTGGATTGGTGCTTATTTGATTAACGAAGC
ACAGATGGTAAATCGAATTACAATTTTCTCGGATATAGTTGTTTTCTCATCGTATGCCATGCAAGTTGTAATGGCATTTA
TGATGGTAAGTATGATTTTTATTATGTTACCTCGTGCTACGGTATCAGCAAAACGTATTATGGAAGTACTTGAAACAGAA
GCGAAAATTACAGATGGTACAGTTACAGAAGGAAAACCAGGTATTGTAGGAGAGATTGAGTTCCGCAATGTTAGCTTTAA
ATATCCAGATTCAGAGAACCATATTCTTCGTAATATTAGCTTTACTGCAAAAAAAGGAGAAACGGTAGCTTTTATTGGAT
CCACGGGGAGTGGAAAAACAAGTTTGGTAAATCTAATTCCTCGTTTCAATGATGTTTCTGAAGGGGAAGTATTGGTTGAT
GGCGTAAATGTAAAAAATTATAGACAAGAAACTCTACACGATAAAATTGGTTACGTTTCACAATCGTCTGTGTTATTCAG
TGGTACTGTAACTTCGAACGTATCCTATGGAGAATCTGGACATATGGATTCGTCACTAAATGCTGTCAAAGAAGCATTGG
AAATTGCACAAGGGAAAGAATTCGTGGAAAAACTTGAAGGACAATATGAAGCGCAGATATCACAAGGTGGTACAAACGTA
TCTGGGGGACAAAAACAGCGTATATCGATTGCACGTGCAATTTATCGGAAACCAGAAATTTATATATTCGATGACTCGTT
TTCAGCATTAGACTACAAAACAGACAGGGTTCTACGTTCTGCTTTAAGAAAAGAAACGAAGGATGCCACTACCTTAATTG
TTGCACAGCGTATCGGAACAATTAAAGACGCAGACCGCATTATTGTGCTTGAAGAGGGAGAAGTAGTTGGGAATGGAACA
CATGAACAATTAATGGATAGCTGCGAGACGTATCAAGAGATTGCATATTCTCAGCTTTCGAAGGAGGAATTGACTGATGG
CCAAAAATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(16-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

53.333

100

0.543