Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   Q2U85_RS06580 Genome accession   NZ_CP130335
Coordinates   1252859..1253542 (+) Length   227 a.a.
NCBI ID   WP_088071264.1    Uniprot ID   -
Organism   Bacillus cereus strain DW444     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1247859..1258542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q2U85_RS06560 (Q2U85_06560) - 1248921..1250567 (+) 1647 WP_153587946.1 peptide ABC transporter substrate-binding protein -
  Q2U85_RS06565 (Q2U85_06565) - 1250597..1250800 (-) 204 WP_000559971.1 hypothetical protein -
  Q2U85_RS06570 (Q2U85_06570) spx 1251394..1251789 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  Q2U85_RS06575 (Q2U85_06575) - 1251839..1252513 (-) 675 WP_000362615.1 TerC family protein -
  Q2U85_RS06580 (Q2U85_06580) mecA 1252859..1253542 (+) 684 WP_088071264.1 adaptor protein MecA Regulator
  Q2U85_RS06585 (Q2U85_06585) - 1253615..1255159 (+) 1545 WP_088071262.1 cardiolipin synthase -
  Q2U85_RS06590 (Q2U85_06590) - 1255240..1256484 (+) 1245 WP_258113071.1 competence protein CoiA -
  Q2U85_RS06595 (Q2U85_06595) pepF 1256536..1258362 (+) 1827 WP_153587945.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26975.06 Da        Isoelectric Point: 3.9986

>NTDB_id=857988 Q2U85_RS06580 WP_088071264.1 1252859..1253542(+) (mecA) [Bacillus cereus strain DW444]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTLGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=857988 Q2U85_RS06580 WP_088071264.1 1252859..1253542(+) (mecA) [Bacillus cereus strain DW444]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTGGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.579

100

0.568