Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QYY55_RS19235 Genome accession   NZ_CP130331
Coordinates   3879614..3880564 (-) Length   316 a.a.
NCBI ID   WP_069482870.1    Uniprot ID   A0A1E4R0V5
Organism   Lysinibacillus fusiformis strain MGMM7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3874614..3885564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QYY55_RS19205 (QYY55_19180) - 3874624..3875526 (-) 903 WP_139133751.1 polyprenyl synthetase family protein -
  QYY55_RS19210 (QYY55_19185) - 3875866..3876405 (+) 540 WP_309370254.1 hypothetical protein -
  QYY55_RS19215 (QYY55_19190) - 3876509..3876823 (-) 315 WP_008175171.1 antibiotic biosynthesis monooxygenase -
  QYY55_RS19220 (QYY55_19195) - 3876825..3877844 (-) 1020 WP_258269470.1 siderophore ABC transporter substrate-binding protein -
  QYY55_RS19225 (QYY55_19200) - 3877910..3878671 (-) 762 WP_193833262.1 ABC transporter ATP-binding protein -
  QYY55_RS19230 (QYY55_19205) - 3878668..3879621 (-) 954 WP_069482869.1 iron chelate uptake ABC transporter family permease subunit -
  QYY55_RS19235 (QYY55_19210) ceuB 3879614..3880564 (-) 951 WP_069482870.1 ABC transporter permease Machinery gene
  QYY55_RS19240 (QYY55_19215) - 3880849..3881901 (-) 1053 WP_069482871.1 hypothetical protein -
  QYY55_RS19245 (QYY55_19220) menC 3881942..3883048 (-) 1107 WP_193833265.1 o-succinylbenzoate synthase -
  QYY55_RS19250 (QYY55_19225) - 3883070..3883894 (-) 825 WP_258269469.1 GNAT family N-acetyltransferase -
  QYY55_RS19255 (QYY55_19230) - 3883894..3885039 (-) 1146 WP_258269468.1 M20 peptidase aminoacylase family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34765.93 Da        Isoelectric Point: 10.1462

>NTDB_id=857939 QYY55_RS19235 WP_069482870.1 3879614..3880564(-) (ceuB) [Lysinibacillus fusiformis strain MGMM7]
MKIRYLLTATVVLSIVSLFIGVVDIKPSDLLDFQSEETRLFLISRVPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATRLGVLISMMFFTNVTYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMYGNILSSVTTFFAYKANII
QNISAWLQGDFSLIMKGRYELLYISVPVLILAYIYANRFTVAGMGEDFAKNLGLSYKFVVNLGLVLVALISTTVVLTVGV
IPFLGLIVPNIISLFKGDNLAKTLPHTALLGMSFLLFCDILGRVLIFPYEIPISMTVGVIGSAIFLVMLFRGRAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=857939 QYY55_RS19235 WP_069482870.1 3879614..3880564(-) (ceuB) [Lysinibacillus fusiformis strain MGMM7]
ATGAAAATAAGATATCTTTTAACAGCAACTGTTGTGTTGTCTATAGTCTCGCTATTTATCGGAGTAGTAGATATTAAACC
AAGTGATCTATTAGACTTCCAATCAGAAGAAACTAGACTATTTTTAATTAGTCGTGTACCTAGACTTGTTGCTATTTTGC
TAGCAGGTGCAGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAGTTCGTATCACCAACGACAGCA
GGTACATTAGATGCCACTCGACTGGGTGTATTGATTTCCATGATGTTTTTCACAAATGTCACGTATTTCCAAAAAATTTC
CTTCGCTTTCATATTTGCTTTAGCCGGCACATTATTATTTATGCAAATATTAAATCGAATTAAGTTTAAAGATGCGATTT
TTATACCGCTTATTGGCTTAATGTATGGTAATATCCTGTCTTCTGTAACAACGTTCTTTGCTTATAAGGCAAATATTATC
CAAAACATTTCTGCATGGTTACAAGGGGATTTCTCATTAATCATGAAAGGCCGTTATGAACTGTTATACATAAGTGTACC
AGTACTTATTTTAGCTTATATTTATGCCAATCGTTTTACAGTAGCCGGTATGGGTGAGGATTTTGCTAAAAATCTTGGTC
TATCCTATAAGTTTGTGGTGAATTTAGGCTTAGTATTGGTGGCTCTTATCTCCACAACAGTTGTGCTAACAGTGGGTGTC
ATTCCATTCCTTGGCTTGATCGTACCGAATATTATTTCACTGTTTAAAGGTGATAATTTGGCAAAAACATTGCCGCATAC
AGCATTACTTGGTATGTCATTCTTATTATTCTGCGATATTTTAGGACGCGTACTGATTTTCCCTTATGAGATTCCAATTA
GTATGACTGTTGGTGTAATTGGAAGTGCCATCTTCCTAGTCATGTTGTTTAGGGGGAGAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E4R0V5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.899

100

0.519