Detailed information NTG0857691

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Q2E61_RS16540
• Genome accession: NZ_CP130317
• Coordinates: 3887296..3888381 (-)
• Length: 361 a.a.
• NCBI ID: WP_074901695.1
• Uniprot ID: A0AB35HXS1
• Organism: Microbulbifer thermotolerans strain HB226069
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3882296..3893381

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q2E61_RS16515 (Q2E61_16515)	trmB	3883171..3883887 (-)	717	WP_067156834.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
Q2E61_RS16520 (Q2E61_16520)	-	3883948..3884325 (-)	378	WP_067156836.1	DUF423 domain-containing protein	-
Q2E61_RS16525 (Q2E61_16525)	rpoH	3884468..3885322 (-)	855	WP_265964441.1	RNA polymerase sigma factor RpoH	-
Q2E61_RS16530 (Q2E61_16530)	ftsX	3885547..3886578 (-)	1032	WP_231902415.1	permease-like cell division protein FtsX	-
Q2E61_RS16535 (Q2E61_16535)	ftsE	3886559..3887245 (-)	687	WP_067156841.1	cell division ATP-binding protein FtsE	-
Q2E61_RS16540 (Q2E61_16540)	pilA	3887296..3888381 (-)	1086	WP_074901695.1	signal recognition particle-docking protein FtsY	Machinery gene
Q2E61_RS16545 (Q2E61_16545)	rsmD	3888456..3889022 (+)	567	WP_067156851.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
Q2E61_RS16550 (Q2E61_16550)	coaD	3889097..3889576 (+)	480	WP_067156857.1	pantetheine-phosphate adenylyltransferase	-
Q2E61_RS16555 (Q2E61_16555)	ggt	3889643..3891388 (+)	1746	WP_302736658.1	gamma-glutamyltransferase	-
Q2E61_RS16560 (Q2E61_16560)	-	3891709..3892278 (-)	570	WP_302736659.1	amidohydrolase family protein	-
Q2E61_RS16565 (Q2E61_16565)	mutM	3892348..3893163 (-)	816	WP_265964434.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 38775.08 Da
• Isoelectric Point: 5.0138

>NTDB_id=857691 Q2E61_RS16540 WP_074901695.1 3887296..3888381(-) (pilA) [Microbulbifer thermotolerans strain HB226069]
MIFDFLRKKKPKPDETVESQTAPEPPESAGDASTPKAEQPEAPREAAEPAPKKEGFFARIRRGLSRTSSQFAEGMGNLFL
GAKEIDEELLEELETQLLVADVGVEATGEIVDRLTERVSRRELADGDALYRALQEELGELLDTVEAPLVVDTSKKPFVIL
VVGVNGVGKTTTIGKLAHRYLREGRSVMLAAGDTFRAAAVEQLQVWGERHNVPVVAQHTGADSASVIYDAVQSARAKGID
VVIADTAGRLHTKSNLMEELAKVRRVMGKLDASAPHEVLLVLDAGTGQNAISQAQQFRDAAGVTGLVLTKLDGTAKGGVI
FALARKFGIPVRFIGVGEQAEDLQPFAAKEFVAALFGREAN

Nucleotide

• Length: 1086 bp

>NTDB_id=857691 Q2E61_RS16540 WP_074901695.1 3887296..3888381(-) (pilA) [Microbulbifer thermotolerans strain HB226069]
ATGATCTTTGATTTCCTGCGCAAAAAGAAGCCCAAACCCGATGAAACAGTGGAGTCCCAGACGGCGCCGGAGCCCCCGGA
GTCAGCGGGGGATGCCTCTACTCCAAAAGCTGAGCAGCCCGAAGCGCCGCGCGAGGCCGCTGAGCCTGCGCCCAAAAAAG
AGGGCTTCTTCGCCCGAATCCGCCGCGGCCTAAGCCGCACCAGCAGCCAGTTTGCCGAGGGCATGGGCAACCTCTTCCTC
GGCGCTAAAGAGATAGACGAGGAACTGCTGGAAGAGCTGGAAACCCAACTGCTGGTGGCGGATGTGGGTGTCGAGGCCAC
TGGTGAAATTGTCGACCGCCTTACCGAGCGGGTTTCCCGGCGCGAACTGGCGGATGGCGATGCGCTCTACCGCGCCCTGC
AGGAAGAGCTGGGTGAGCTGCTGGATACAGTGGAGGCGCCACTGGTGGTCGATACGTCCAAGAAGCCTTTTGTGATCCTG
GTAGTGGGCGTCAACGGTGTTGGCAAGACCACGACCATCGGCAAGCTGGCCCACCGCTACCTGAGGGAAGGCAGGTCAGT
GATGCTGGCCGCGGGCGATACCTTCCGCGCCGCTGCGGTGGAGCAGCTGCAGGTCTGGGGGGAGCGCCACAATGTACCGG
TAGTGGCTCAGCACACCGGTGCCGACAGCGCCTCGGTTATCTACGATGCGGTGCAATCGGCGCGCGCCAAGGGGATTGAT
GTGGTGATTGCCGATACCGCCGGGCGCCTGCACACCAAGTCCAATTTGATGGAAGAGCTTGCCAAGGTGCGCCGGGTAAT
GGGCAAGCTGGACGCCAGCGCCCCGCACGAAGTACTGCTGGTGCTGGATGCCGGTACCGGCCAGAATGCCATCAGCCAGG
CCCAACAGTTCCGCGACGCGGCCGGTGTCACCGGCCTGGTGCTGACGAAGTTGGACGGCACCGCCAAGGGCGGTGTGATC
TTTGCCCTGGCACGCAAGTTCGGGATTCCGGTACGCTTTATCGGCGTCGGCGAGCAGGCCGAAGATCTACAGCCGTTTGC
CGCGAAAGAATTTGTCGCCGCGCTTTTCGGTCGCGAAGCGAACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (73-137)

• SRP54-type protein, GTPase domain (SRP54) (156-356)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.858	97.784	0.488