Detailed information NTG0857487

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V8N89_RS02395
• Genome accession: NZ_CP147009
• Coordinates: 489351..490334 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain FACU 2024
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 484351..495334

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V8N89_RS02370	bcsF	484512..484703 (+)	192	WP_069904889.1	cellulose biosynthesis protein BcsF	-
V8N89_RS02375	bcsG	484700..486379 (+)	1680	WP_000191596.1	cellulose biosynthesis protein BcsG	-
V8N89_RS02380	ldrD	486466..486573 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
V8N89_RS02385	yhjV	487049..488320 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
V8N89_RS02390	dppF	488350..489354 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V8N89_RS02395	amiE	489351..490334 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V8N89_RS02400	dppC	490345..491247 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V8N89_RS02405	dppB	491257..492276 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V8N89_RS02410	-	492440..492550 (+)	111	Protein_471	hypothetical protein	-
V8N89_RS02415	dppA	492584..494191 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=857487 V8N89_RS02395 WP_001196486.1 489351..490334(-) (amiE) [Escherichia coli strain FACU 2024]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=857487 V8N89_RS02395 WP_001196486.1 489351..490334(-) (amiE) [Escherichia coli strain FACU 2024]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404