Detailed information NTG0857019

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V9Z43_RS00925
• Genome accession: NZ_CP146687
• Coordinates: 204416..205399 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain MS 198-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 199416..210399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9Z43_RS00910 (V9Z43_00910)	dppA	200716..202323 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
V9Z43_RS00915 (V9Z43_00915)	dppB	202474..203493 (+)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
V9Z43_RS00920 (V9Z43_00920)	dppC	203503..204405 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V9Z43_RS00925 (V9Z43_00925)	amiE	204416..205399 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V9Z43_RS00930 (V9Z43_00930)	dppF	205396..206400 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V9Z43_RS00935 (V9Z43_00935)	yhjV	206430..207701 (-)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
V9Z43_RS00940 (V9Z43_00940)	-	208177..208284 (+)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
V9Z43_RS00945 (V9Z43_00945)	-	208660..208767 (+)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=857019 V9Z43_RS00925 WP_001196486.1 204416..205399(+) (amiE) [Escherichia coli strain MS 198-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=857019 V9Z43_RS00925 WP_001196486.1 204416..205399(+) (amiE) [Escherichia coli strain MS 198-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404