Detailed information NTG0856936

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V9Z39_RS01125
• Genome accession: NZ_CP146681
• Coordinates: 243992..244975 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain MS 196-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 238992..249975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9Z39_RS01100 (V9Z39_01100)	bcsF	239153..239344 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
V9Z39_RS01105 (V9Z39_01105)	bcsG	239341..241020 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
V9Z39_RS01110 (V9Z39_01110)	ldrD	241107..241214 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
V9Z39_RS01115 (V9Z39_01115)	yhjV	241690..242961 (+)	1272	Protein_221	aromatic amino acid transport family protein	-
V9Z39_RS01120 (V9Z39_01120)	dppF	242991..243995 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V9Z39_RS01125 (V9Z39_01125)	amiE	243992..244975 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V9Z39_RS01130 (V9Z39_01130)	dppC	244986..245888 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V9Z39_RS01135 (V9Z39_01135)	dppB	245898..246917 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V9Z39_RS01140 (V9Z39_01140)	-	247081..247191 (+)	111	Protein_226	hypothetical protein	-
V9Z39_RS01145 (V9Z39_01145)	dppA	247225..248832 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=856936 V9Z39_RS01125 WP_001196486.1 243992..244975(-) (amiE) [Escherichia coli strain MS 196-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=856936 V9Z39_RS01125 WP_001196486.1 243992..244975(-) (amiE) [Escherichia coli strain MS 196-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404