Detailed information NTG0856847

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V9Z41_RS00900
• Genome accession: NZ_CP146679
• Coordinates: 187662..188645 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS 200-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 182662..193645

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9Z41_RS00880 (V9Z41_00880)	dppA	183806..185413 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
V9Z41_RS00885 (V9Z41_00885)	-	185475..185702 (-)	228	WP_000198576.1	hypothetical protein	-
V9Z41_RS00890 (V9Z41_00890)	dppB	185720..186739 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V9Z41_RS00895 (V9Z41_00895)	dppC	186749..187651 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V9Z41_RS00900 (V9Z41_00900)	amiE	187662..188645 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
V9Z41_RS00905 (V9Z41_00905)	dppF	188642..189646 (+)	1005	WP_000103577.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V9Z41_RS00910 (V9Z41_00910)	yhjV	189676..190947 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
V9Z41_RS00915 (V9Z41_00915)	ldrD	191423..191530 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V9Z41_RS00920 (V9Z41_00920)	bcsG	191617..193296 (-)	1680	WP_000191565.1	cellulose biosynthesis protein BcsG	-
V9Z41_RS00925 (V9Z41_00925)	bcsF	193293..193484 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=856847 V9Z41_RS00900 WP_001196477.1 187662..188645(+) (amiE) [Escherichia coli strain MS 200-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=856847 V9Z41_RS00900 WP_001196477.1 187662..188645(+) (amiE) [Escherichia coli strain MS 200-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404