Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QY917_RS11035 Genome accession   NZ_CP129980
Coordinates   2321887..2322279 (-) Length   130 a.a.
NCBI ID   WP_015914196.1    Uniprot ID   A0AAX1WT95
Organism   Diaphorobacter sp. C33     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2316887..2327279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QY917_RS11020 (QY917_11020) - 2318680..2320944 (-) 2265 WP_123676173.1 methyl-accepting chemotaxis protein -
  QY917_RS11025 (QY917_11025) - 2320966..2321493 (-) 528 WP_011806673.1 chemotaxis protein CheW -
  QY917_RS11030 (QY917_11030) - 2321510..2321875 (-) 366 WP_011806674.1 PleD family two-component system response regulator -
  QY917_RS11035 (QY917_11035) pilG 2321887..2322279 (-) 393 WP_015914196.1 PleD family two-component system response regulator Regulator
  QY917_RS11040 (QY917_11040) - 2322331..2322483 (-) 153 WP_011806676.1 rubredoxin -
  QY917_RS11045 (QY917_11045) - 2322599..2323543 (+) 945 WP_011806677.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  QY917_RS11050 (QY917_11050) hemL 2323527..2324831 (+) 1305 WP_123676172.1 glutamate-1-semialdehyde 2,1-aminomutase -
  QY917_RS11055 (QY917_11055) - 2325014..2326774 (+) 1761 WP_123676171.1 alkaline phosphatase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14449.60 Da        Isoelectric Point: 6.9235

>NTDB_id=856826 QY917_RS11035 WP_015914196.1 2321887..2322279(-) (pilG) [Diaphorobacter sp. C33]
MATTTTGPTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNAR
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=856826 QY917_RS11035 WP_015914196.1 2321887..2322279(-) (pilG) [Diaphorobacter sp. C33]
TTGGCTACGACGACGACCGGTCCCACCTTCCGTGTCCTGGTGGTGGACGACAGCAATACCATACGGCGCAGCGCCGAAAT
TTTCCTCAAGCAGGGAGGGCACGAGGTTTTATTGGCCGACGATGGTTTCGATGCCTTGGCCAAAGTCAATGATTACCAGC
CTCAGCTGATTTTCTGCGACATCCTCATGCCTAAGCTGGATGGTTATCAGACCTGCGCCATCATCAAACGCAACGCGCGT
TTTGCTGATACGCCCGTGGTAATGCTTTCATCCAAGGACGGGGTTTTCGATAAGGCGCGCGGCCGTATGGTCGGTTGCCA
GGAATATCTGACCAAACCATTTACCAAAGACCAGTTGCTGCAGGCTGTGCAGCAATTTGGAAATGCCCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.41

90

0.508