Detailed information NTG0856825

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: QY917_RS10745
• Genome accession: NZ_CP129980
• Coordinates: 2259528..2260676 (+)
• Length: 382 a.a.
• NCBI ID: WP_123676194.1
• Uniprot ID: A0AAX1WT97
• Organism: Diaphorobacter sp. C33
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2254528..2265676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QY917_RS10725 (QY917_10725)	coaD	2255383..2255880 (-)	498	WP_011806614.1	pantetheine-phosphate adenylyltransferase	-
QY917_RS10730 (QY917_10730)	rsmD	2256026..2256649 (-)	624	WP_123676197.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
QY917_RS10735 (QY917_10735)	-	2256646..2258028 (-)	1383	WP_123676196.1	pitrilysin family protein	-
QY917_RS10740 (QY917_10740)	-	2258044..2259498 (-)	1455	WP_123676195.1	pitrilysin family protein	-
QY917_RS10745 (QY917_10745)	pilA	2259528..2260676 (+)	1149	WP_123676194.1	signal recognition particle-docking protein FtsY	Machinery gene
QY917_RS10750 (QY917_10750)	cutA	2260753..2261088 (-)	336	WP_123676193.1	divalent-cation tolerance protein CutA	-
QY917_RS10755 (QY917_10755)	rpoH	2261278..2262213 (+)	936	WP_088888417.1	RNA polymerase sigma factor RpoH	-
QY917_RS10760 (QY917_10760)	-	2262352..2263362 (+)	1011	WP_047349758.1	tripartite tricarboxylate transporter substrate binding protein	-
QY917_RS10765 (QY917_10765)	-	2263599..2264381 (+)	783	WP_088888415.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 39815.52 Da
• Isoelectric Point: 5.7333

>NTDB_id=856825 QY917_RS10745 WP_123676194.1 2259528..2260676(+) (pilA) [Diaphorobacter sp. C33]
MFSFFKKKSPAPTEPALAPEDVASPAAPPAADAPASGGAFGWLRKPFGAGATSVAEPAAPSAGAPAAIDAPLAVPEPTPK
PEGARQGWMDRLKSGLRKTGSSIATVFTGTQINDALYDELEEALLMADTGVKATQHLLEDLKRRVKETKTTEPAAVKGLL
ADALADLLRPLEKPLVIGEHTPTVIMVAGVNGAGKTTSIGKLTKHLADHGESVLLAAADTFRAAAREQLGVWATRNTVEI
VSQEGGDPAAVSFDAVTAGRARGKDVVLVDTAGRLPTQLHLMEELKKIRRVVTKADASAPHEVLLVIDGNTGQNALAQVR
AFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPVPVYFIGVGEKVEDLETFSAREFAQALLS

Nucleotide

• Length: 1149 bp

>NTDB_id=856825 QY917_RS10745 WP_123676194.1 2259528..2260676(+) (pilA) [Diaphorobacter sp. C33]
ATGTTCAGTTTTTTCAAGAAGAAATCGCCCGCCCCCACCGAACCCGCCCTTGCACCCGAGGACGTGGCCAGCCCTGCGGC
GCCGCCCGCGGCCGACGCCCCCGCCAGCGGCGGCGCATTCGGCTGGCTGCGCAAGCCCTTTGGCGCAGGCGCCACCAGCG
TGGCGGAGCCGGCTGCCCCTTCGGCCGGTGCCCCCGCAGCCATCGACGCGCCCCTTGCCGTCCCCGAACCCACGCCGAAG
CCCGAGGGCGCACGCCAGGGCTGGATGGACCGGCTGAAATCCGGCCTGCGCAAGACCGGCAGCAGCATCGCGACCGTCTT
CACGGGCACGCAGATCAACGACGCGCTGTACGACGAGCTGGAGGAAGCCCTGCTCATGGCCGACACCGGGGTGAAAGCCA
CGCAGCACCTGCTGGAGGACCTCAAGCGCCGCGTGAAAGAGACCAAGACCACCGAGCCTGCTGCCGTAAAGGGACTGCTG
GCCGATGCGCTGGCCGACCTGCTGCGGCCGCTGGAAAAGCCGCTGGTGATCGGCGAGCACACACCCACCGTGATCATGGT
GGCCGGCGTGAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTCACCAAGCACCTGGCCGACCATGGCGAGAGCGTGC
TGCTGGCCGCCGCCGATACCTTCCGCGCCGCGGCGCGCGAGCAGTTGGGTGTCTGGGCCACGCGCAACACGGTGGAGATC
GTCAGCCAGGAAGGGGGCGACCCTGCCGCCGTGAGCTTTGACGCCGTTACCGCCGGCCGCGCGCGCGGCAAAGATGTGGT
GCTGGTGGACACTGCCGGCCGCCTGCCTACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGATCCGCCGCGTGGTCACCA
AGGCCGATGCCAGCGCCCCGCACGAGGTGCTACTGGTGATCGACGGCAACACCGGCCAGAACGCCCTGGCGCAGGTGCGC
GCGTTCGACGACGCGCTTCAACTCACCGGCCTGATCGTCACCAAACTGGACGGCACGGCCAAGGGCGGCGTGCTGGCCGC
CATCGCGCAGGAGCGGCCCGTGCCCGTGTACTTCATTGGCGTGGGCGAGAAGGTGGAAGACCTGGAAACCTTCAGCGCAC
GCGAATTCGCCCAGGCCCTGCTGAGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (182-381)

• SRP54-type protein, helical bundle domain (SRP54_N) (101-164)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.12	100	0.547