Detailed information NTG0856679

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V9Z47_RS01075
• Genome accession: NZ_CP146670
• Coordinates: 232926..233909 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196446.1
• Uniprot ID: -
• Organism: Escherichia coli strain MS 21-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 227926..238909

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9Z47_RS01060 (V9Z47_01060)	dppA	229226..230833 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
V9Z47_RS01065 (V9Z47_01065)	dppB	230984..232003 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V9Z47_RS01070 (V9Z47_01070)	dppC	232013..232915 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V9Z47_RS01075 (V9Z47_01075)	amiE	232926..233909 (+)	984	WP_001196446.1	dipeptide ABC transporter ATP-binding protein	Regulator
V9Z47_RS01080 (V9Z47_01080)	dppF	233906..234910 (+)	1005	WP_000103576.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V9Z47_RS01085 (V9Z47_01085)	-	234940..235233 (-)	294	Protein_214	transporter	-
V9Z47_RS01090 (V9Z47_01090)	-	235290..235987 (+)	698	WP_094096600.1	IS1-like element IS1A family transposase	-
V9Z47_RS01095 (V9Z47_01095)	-	235977..236988 (-)	1012	Protein_216	aromatic amino acid transport family protein	-
V9Z47_RS01100 (V9Z47_01100)	-	237464..237571 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V9Z47_RS01105 (V9Z47_01105)	-	237947..238054 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V9Z47_RS01110 (V9Z47_01110)	-	238430..238537 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35829.43 Da
• Isoelectric Point: 6.5816

>NTDB_id=856679 V9Z47_RS01075 WP_001196446.1 232926..233909(+) (amiE) [Escherichia coli strain MS 21-1]
MALLNIDKLSVHFGEESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=856679 V9Z47_RS01075 WP_001196446.1 232926..233909(+) (amiE) [Escherichia coli strain MS 21-1]
ATGGCGTTATTAAATATAGATAAATTATCGGTGCATTTCGGCGAAGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTCAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGATAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTACGACCGTCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401