Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxQ   Type   Regulator
Locus tag   QZL45_RS14825 Genome accession   NZ_CP129945
Coordinates   65865..68432 (-) Length   855 a.a.
NCBI ID   WP_308413494.1    Uniprot ID   -
Organism   Vibrio fluvialis strain I7A     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context


Location: 60865..73432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZL45_RS14800 modA 61560..62345 (-) 786 WP_055453540.1 molybdate ABC transporter substrate-binding protein -
  QZL45_RS14805 - 62342..63826 (-) 1485 WP_308413493.1 cobyric acid synthase -
  QZL45_RS14810 - 63993..64367 (+) 375 WP_020433707.1 YgiW/YdeI family stress tolerance OB fold protein -
  QZL45_RS14815 - 64520..65044 (+) 525 WP_158146148.1 hypothetical protein -
  QZL45_RS14820 - 65179..65859 (+) 681 WP_020433710.1 flagellar brake protein -
  QZL45_RS14825 luxQ 65865..68432 (-) 2568 WP_308413494.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ Regulator
  QZL45_RS14830 luxP 68454..69551 (-) 1098 WP_024375537.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  QZL45_RS14835 - 69762..70919 (-) 1158 WP_308413495.1 conjugal transfer protein TraF -
  QZL45_RS14840 - 71033..71314 (-) 282 WP_020433718.1 GIY-YIG nuclease family protein -
  QZL45_RS14845 - 71325..71960 (-) 636 WP_020433719.1 YceH family protein -
  QZL45_RS14850 - 72005..72202 (-) 198 WP_020329288.1 hypothetical protein -
  QZL45_RS14855 - 72392..72709 (+) 318 WP_020329287.1 DUF496 family protein -

Sequence


Protein


Download         Length: 855 a.a.        Molecular weight: 96190.58 Da        Isoelectric Point: 5.0783

>NTDB_id=856633 QZL45_RS14825 WP_308413494.1 65865..68432(-) (luxQ) [Vibrio fluvialis strain I7A]
MGIRSSTVKQKRKIATFISRAIVTVLGALTLTVLFQSYQISSRLISQEVARTSTQTSSLIQNLFNYRLATLQIHQDSSAK
NASLIQALHGDTNDALDQYFLSVDQLELNNTPDIRFITDLKEMVWEDGNSQFYGVQSKELNAIIRKVSISSNWHLIQTPS
ELGTAYLLVRRSPIVDTATGEVIGFLYVSIVLNNNFASIETIRDSSNSQNLILTVGSEVLASTLNGDESYTAFDVLQDGM
SDMLYDKNMVAKTVLEVEGVPTYLSVYSVQSNENALSLRDNYYFWMVFALVAMVGVSILTRWWLQRRIESEIEGLMTYTH
KVAERGLDDFFPGSKIYEFDHFGRTLEHTFQRLSAQEKQFEDLFNFALSPTILWTADGELIRMNPSAQKHFLRNNAEYHS
LFSVLKRQLIPQIKLAAKGEILKEVNTEVDDKVFLWNLSPIVVENRIESIITQGQDVTSIAEAEKQSRIARREAEESARV
RADFLAKMSHELRTPLNGILGVSQLLKRTVKEKEQAEQVNVLCSSGEHLLAVLNDILDFSKIEQGKFRIQKTHFPLVDVV
SAIERIYRPLCREKGLDLSIDSNIDQTMIVNADQVRLNQILFNLLNNAVKFTHQGAISIQLNLLQEAGDTHLSISVMDTG
IGIRDADLNIIFEPFVQAESTNTREYGGSGLGLAIVHSLIEMLGGTVQVSSTFGVGTRFNIELPMERVTSEKQSIERKEA
ASRYELFDGSIHVLLVEDNHTNAFIAQAFCKKYGMVVDWVTDGLQAIEKVKEQRYDLILMDNQLPYLDGVDATRIIKQEM
GLGIPVYACTADGVVETQQAFMSAGAEYVIVKPIKEDTLHKALVNFKQDHTEWSV

Nucleotide


Download         Length: 2568 bp        

>NTDB_id=856633 QZL45_RS14825 WP_308413494.1 65865..68432(-) (luxQ) [Vibrio fluvialis strain I7A]
GTGGGCATCAGATCAAGCACAGTCAAACAGAAAAGAAAAATCGCAACGTTCATCAGCCGAGCGATTGTGACGGTGCTTGG
TGCGCTGACGTTGACGGTACTGTTTCAAAGCTATCAAATCAGCAGTCGTTTGATCTCACAGGAAGTGGCCCGCACTTCAA
CTCAAACCTCCAGCCTGATTCAGAACCTGTTCAATTACCGATTGGCCACGCTGCAGATTCATCAGGACAGTAGCGCAAAA
AATGCCAGTTTGATTCAGGCTCTGCACGGCGATACTAATGACGCACTGGATCAGTACTTTCTCAGTGTTGACCAGCTTGA
ACTCAACAATACGCCGGATATTCGTTTCATTACCGACCTCAAAGAGATGGTATGGGAAGACGGCAACTCTCAGTTTTATG
GGGTTCAGTCGAAAGAGCTCAATGCCATCATCCGAAAAGTGTCAATCAGCAGTAACTGGCACCTAATCCAAACGCCTTCA
GAGTTAGGCACGGCCTACCTGCTTGTTCGCCGCTCACCGATTGTGGATACCGCAACCGGCGAAGTCATCGGTTTTCTCTA
CGTCAGTATTGTACTCAACAACAACTTTGCGTCAATCGAGACCATTCGTGACAGCAGTAACTCGCAGAACCTGATTTTGA
CCGTTGGTTCAGAAGTTTTGGCGTCGACTCTGAATGGAGACGAATCCTATACAGCGTTCGATGTGTTGCAGGACGGTATG
AGCGACATGCTGTACGACAAAAACATGGTGGCGAAAACGGTTCTGGAAGTGGAAGGGGTGCCGACTTATCTCAGTGTTTA
CTCAGTTCAGAGCAACGAGAATGCGTTGAGCCTGCGTGACAACTACTATTTCTGGATGGTTTTTGCGCTGGTGGCGATGG
TGGGTGTCTCCATTCTGACGCGTTGGTGGTTGCAGCGACGAATTGAGTCGGAAATTGAAGGGTTGATGACCTACACCCAT
AAAGTGGCGGAGCGTGGACTGGATGACTTCTTCCCGGGCTCAAAAATTTACGAATTTGACCACTTTGGTCGCACGCTGGA
ACACACTTTCCAGCGACTGTCTGCGCAGGAAAAACAATTTGAGGATCTGTTTAACTTCGCTTTGTCGCCAACCATTCTCT
GGACGGCAGACGGTGAGCTGATTCGTATGAACCCGTCGGCTCAGAAGCATTTTCTGCGCAACAATGCGGAATATCACTCG
CTGTTCTCTGTGCTGAAACGTCAGTTGATCCCGCAGATCAAACTGGCGGCAAAAGGCGAGATTCTCAAAGAAGTGAACAC
TGAAGTCGACGACAAAGTGTTCCTGTGGAACCTGTCGCCGATTGTGGTGGAGAACCGTATCGAATCGATTATTACTCAGG
GCCAGGATGTCACCTCGATTGCAGAAGCGGAAAAACAGAGCCGTATTGCACGTAGAGAAGCGGAAGAGTCGGCACGCGTC
AGAGCGGATTTCCTCGCGAAAATGAGCCATGAGCTGAGAACGCCACTGAACGGGATTCTGGGTGTGTCTCAACTCCTTAA
GCGTACAGTGAAGGAAAAAGAGCAGGCCGAGCAGGTTAATGTGCTGTGCAGCAGTGGTGAACATCTGCTGGCAGTACTGA
ATGACATTCTGGATTTCTCAAAGATAGAGCAGGGTAAATTCCGGATTCAGAAGACCCATTTCCCGTTGGTCGATGTGGTG
TCGGCCATTGAACGAATTTATCGTCCATTGTGTCGTGAGAAAGGCTTGGATCTCTCGATTGACAGCAATATCGACCAAAC
AATGATTGTAAATGCGGACCAGGTACGTCTGAATCAGATTCTGTTTAATCTGCTCAATAACGCCGTGAAGTTTACCCATC
AGGGCGCCATCAGCATTCAGCTGAATCTGTTGCAAGAGGCGGGCGACACTCACTTGTCTATTTCGGTCATGGACACAGGT
ATTGGTATTCGTGATGCCGATTTGAATATCATCTTTGAGCCGTTTGTTCAGGCAGAATCGACCAATACCCGCGAATATGG
CGGCAGTGGATTGGGGCTGGCCATTGTGCACAGCCTGATTGAGATGCTTGGCGGCACTGTGCAGGTCAGCTCGACGTTTG
GTGTGGGCACGCGTTTTAATATCGAATTGCCGATGGAACGTGTTACCTCTGAAAAACAGTCGATTGAGCGCAAAGAAGCC
GCATCACGTTATGAGCTGTTCGATGGCAGCATTCATGTTCTGCTGGTTGAAGACAACCATACCAACGCGTTTATCGCACA
AGCCTTCTGCAAGAAATATGGCATGGTCGTCGACTGGGTCACGGATGGATTGCAGGCGATCGAAAAGGTCAAAGAGCAGC
GTTACGATCTGATTCTGATGGACAACCAACTGCCGTATCTCGACGGTGTGGATGCCACGCGCATCATCAAACAAGAAATG
GGCTTAGGAATACCAGTTTACGCCTGTACCGCAGATGGCGTGGTGGAAACTCAGCAAGCGTTTATGTCTGCCGGTGCAGA
ATACGTGATCGTCAAGCCGATCAAAGAAGATACGCTGCACAAAGCATTGGTGAACTTTAAACAAGACCACACAGAGTGGT
CTGTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxQ Vibrio cholerae strain A1552

63.38

99.649

0.632