Detailed information NTG0856594

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V9Z40_RS01035
• Genome accession: NZ_CP146667
• Coordinates: 215583..216566 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS 16-3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 210583..221566

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9Z40_RS01020 (V9Z40_01020)	dppA	211883..213490 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
V9Z40_RS01025 (V9Z40_01025)	dppB	213641..214660 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V9Z40_RS01030 (V9Z40_01030)	dppC	214670..215572 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V9Z40_RS01035 (V9Z40_01035)	amiE	215583..216566 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
V9Z40_RS01040 (V9Z40_01040)	dppF	216563..217567 (+)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V9Z40_RS01045 (V9Z40_01045)	yhjV	217597..218868 (-)	1272	WP_001334058.1	aromatic amino acid transport family protein	-
V9Z40_RS01050 (V9Z40_01050)	-	219344..219451 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
V9Z40_RS01055 (V9Z40_01055)	-	219826..219933 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V9Z40_RS01060 (V9Z40_01060)	-	220309..220416 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=856594 V9Z40_RS01035 WP_001196477.1 215583..216566(+) (amiE) [Escherichia coli strain MS 16-3]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=856594 V9Z40_RS01035 WP_001196477.1 215583..216566(+) (amiE) [Escherichia coli strain MS 16-3]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404