Detailed information NTG0085657

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: KJS40_RS14410
• Genome accession: NZ_AP024515
• Coordinates: 3236822..3237808 (+)
• Length: 328 a.a.
• NCBI ID: WP_213538531.1
• Uniprot ID: -
• Organism: Nitrosospira sp. NRS527
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3231822..3242808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJS40_RS14380 (NNRS527_03063)	-	3231862..3232593 (+)	732	WP_213538526.1	YggS family pyridoxal phosphate-dependent enzyme	-
KJS40_RS14385 (NNRS527_03064)	-	3232559..3232828 (-)	270	WP_213538527.1	YfhL family 4Fe-4S dicluster ferredoxin	-
KJS40_RS14390 (NNRS527_03065)	coaD	3232843..3233322 (-)	480	WP_213538528.1	pantetheine-phosphate adenylyltransferase	-
KJS40_RS14395 (NNRS527_03066)	rsmD	3233315..3233863 (-)	549	WP_213538529.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
KJS40_RS14400 (NNRS527_03067)	-	3233927..3235237 (-)	1311	WP_213538530.1	pitrilysin family protein	-
KJS40_RS14405 (NNRS527_03068)	-	3235304..3236632 (-)	1329	WP_244859787.1	pitrilysin family protein	-
KJS40_RS14410 (NNRS527_03069)	pilA	3236822..3237808 (+)	987	WP_213538531.1	signal recognition particle-docking protein FtsY	Machinery gene
KJS40_RS14415 (NNRS527_03070)	ftsE	3237860..3238513 (+)	654	WP_025041850.1	cell division ATP-binding protein FtsE	-
KJS40_RS14420 (NNRS527_03071)	ftsX	3238510..3239418 (+)	909	WP_213538532.1	permease-like cell division protein FtsX	-
KJS40_RS14425 (NNRS527_03072)	rpoH	3239509..3240354 (+)	846	WP_213538533.1	RNA polymerase sigma factor RpoH	-
KJS40_RS14430 (NNRS527_03073)	-	3240671..3240919 (-)	249	WP_072768148.1	BolA/IbaG family iron-sulfur metabolism protein	-
KJS40_RS14435 (NNRS527_03074)	-	3241016..3241771 (-)	756	WP_213538534.1	ABC transporter permease	-
KJS40_RS14440 (NNRS527_03075)	-	3241768..3242700 (-)	933	WP_213539872.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 328 a.a.
• Molecular weight: 34911.05 Da
• Isoelectric Point: 9.3736

>NTDB_id=85657 KJS40_RS14410 WP_213538531.1 3236822..3237808(+) (pilA) [Nitrosospira sp. NRS527]
MPGFFKSKNSAAPAEPASTNWSARVRQGLSRTRDNLGRRLSGLFGGGKIDEALYEELETILLTADAGVNATTWLLGELRS
EVRRKGLTDAAQLKGALQEALAALLEPLVQPLDTDTSKPFIIMLAGVNGAGKTTSIGKLAHYFQLQRKTVLLAAGDTFRA
AAREQLMAWGERNNVAVIAQENSGQQKGDPAAVIFDAVNAAKARGIDIVLADTAGRLATQLHLMEEIKKVKRVIAKAEPG
APHETLLVLDANTGQNAVAQVQAFDDALGLTGLIVTKLDGTAKGGVIAAIARQRQKKTPLPIRFIGVGEGLDDLRPFVAS
EFVEALFD

Nucleotide

• Length: 987 bp

>NTDB_id=85657 KJS40_RS14410 WP_213538531.1 3236822..3237808(+) (pilA) [Nitrosospira sp. NRS527]
ATGCCAGGTTTCTTTAAATCCAAAAATAGCGCTGCCCCTGCGGAACCCGCGTCCACGAATTGGTCAGCGCGGGTCAGGCA
GGGGCTCTCCCGTACCCGGGATAACCTGGGTAGGCGCCTGTCCGGCCTGTTCGGCGGTGGTAAAATAGACGAAGCGCTCT
ATGAGGAATTGGAAACGATCCTGCTCACCGCGGATGCCGGCGTAAATGCGACGACGTGGCTGCTTGGCGAACTGCGAAGC
GAAGTCAGACGCAAAGGCCTTACCGATGCGGCGCAACTCAAGGGCGCGTTGCAGGAAGCCCTCGCTGCTTTACTTGAGCC
ACTGGTGCAGCCTCTCGACACGGATACGAGCAAGCCCTTTATCATTATGCTGGCCGGCGTGAACGGCGCGGGGAAAACCA
CCTCTATCGGAAAACTTGCCCATTATTTTCAGTTACAGCGAAAGACCGTTCTGCTTGCCGCCGGCGATACGTTTCGTGCC
GCCGCACGTGAACAACTGATGGCCTGGGGCGAGCGCAACAATGTCGCCGTCATCGCCCAGGAGAATAGCGGCCAGCAAAA
GGGCGATCCTGCGGCGGTAATATTCGATGCGGTTAATGCCGCGAAAGCACGTGGCATCGATATCGTACTCGCGGATACCG
CCGGACGGCTCGCCACGCAACTGCATCTCATGGAGGAAATCAAGAAAGTCAAACGCGTCATCGCCAAAGCCGAGCCGGGC
GCACCCCATGAAACGCTGCTGGTGCTCGACGCCAACACCGGCCAGAATGCGGTTGCTCAGGTGCAAGCCTTTGACGACGC
GCTGGGTCTCACCGGACTTATCGTCACCAAGCTCGATGGTACGGCAAAAGGTGGGGTAATCGCTGCTATCGCCAGACAAC
GCCAGAAGAAAACGCCGCTACCTATTCGTTTTATCGGCGTGGGTGAGGGCCTCGATGATTTGAGGCCGTTCGTCGCAAGT
GAATTTGTCGAGGCACTTTTTGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (119-327)

• SRP54-type protein, helical bundle domain (SRP54_N) (36-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	66.149	98.171	0.649