Detailed information NTG0856567

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: QZL35_RS12720
• Genome accession: NZ_CP129940
• Coordinates: 2782289..2785675 (+)
• Length: 1128 a.a.
• NCBI ID: WP_064354276.1
• Uniprot ID: -
• Organism: Vibrio alginolyticus strain I25B
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2777289..2790675

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QZL35_RS12700	erpA	2777648..2777989 (-)	342	WP_005380031.1	iron-sulfur cluster insertion protein ErpA	-
QZL35_RS12705	hemL	2778236..2779531 (+)	1296	WP_005380032.1	glutamate-1-semialdehyde 2,1-aminomutase	-
QZL35_RS12710	-	2779877..2780962 (+)	1086	WP_005386541.1	AI-2E family transporter	-
QZL35_RS12715	rsmC	2781039..2782064 (+)	1026	WP_017820412.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
QZL35_RS12720	chiS	2782289..2785675 (+)	3387	WP_064354276.1	response regulator	Regulator
QZL35_RS12725	-	2786456..2788138 (+)	1683	WP_005380037.1	ABC transporter substrate-binding protein	-
QZL35_RS12730	-	2788309..2789295 (+)	987	WP_053304108.1	ABC transporter permease	-
QZL35_RS12735	-	2789298..2790323 (+)	1026	WP_213913776.1	ABC transporter permease	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 126775.42 Da
• Isoelectric Point: 5.4999

>NTDB_id=856567 QZL35_RS12720 WP_064354276.1 2782289..2785675(+) (chiS) [Vibrio alginolyticus strain I25B]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFEARETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGNDIEESRKNAQQRYIEGSGDQIKTSTLPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDINGNVTYSINKDDNYGTNLLSGPYKDSALGKTFKRLADDVTERRKVNEDYTPVIVSDFELEGGKSVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLAADANRESSINTLLVGNDHQPRTINTKQDDIKNSLEVIDKALSGAFGVGTYTNGLGEE
IIAAYAPIETRGVIWALVVQLPENEAFARIHQLEKLFVIAMLIAIILVVIASHYLSNFITSPLLKLTWVAEKVSAGDLDD
TSFNTVRKDEIGRLALSFERMQRSIREKIQTIKKQNEELESSIQIIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLASGANGAIPASQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLGSATRLVLELSSHLLGSKTIRI
INQVPADLKAVSADPQRLEQVLYNLIGNAIKYTSEGKIVISANVVDDHVRVQVVDTGQGIPAEQLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASEEEIQATQTLAAHGHFQIPEVNVENSEDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTVSDGPETLALVEQEKPELLLLDIMMPGMSGYQVCSELREAYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEMRHMENKVLESELRQRAVVEASLLETQGRLLEQLE
SAPEAIICLREDKRIRFANEAACKLFKRSLEQLKRSSADELIAPKYLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDIMYIFNVGGGASAARIHNLETAVEVLSSYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDAMTHA
LEYWESVTGESKFAFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=856567 QZL35_RS12720 WP_064354276.1 2782289..2785675(+) (chiS) [Vibrio alginolyticus strain I25B]
ATGTTTAAATTCTACAAAAAACAGAAATTTAAGCGCCTTCAGAGTACACTGATGACCGCATTTCTGGTGCTCAGTATCAC
ACCTCTTACCATTACTGCGATCTTTTTCTTGCAGTCCCACAGTAAAGATCTGCAAGAACAAAGCACCTCGCACTTACTGT
CTGTTCGAGATACAAAACAGCAGCAAATCATCGACTACTTTGAGGCACGAGAAACCGAAGTCATGGGCTTTGTGCGCTCA
GAGTTGGCTTACGCCAGTGGTGGCCGATTCTACGGTCTCGTCAATGCTTTTAGTCGTTTAGGCAATGATATTGAAGAGTC
TCGTAAAAACGCCCAACAGCGCTACATCGAGGGCAGCGGAGACCAAATCAAAACCTCAACGTTACCCGAGTCATCCAACT
ATGTAGGAAGTGAACGTTACCGGCTTTTGCATAAACGCTATCATTGGGCCTACTTGGAGCTCCTCAAGCGCTCTGATTTT
AATGACATTTTGCTGGTCGACATCAATGGTAACGTCACCTACTCGATCAACAAAGACGATAACTACGGAACGAACTTGTT
ATCAGGCCCCTACAAAGACTCGGCACTTGGCAAAACTTTCAAGCGTCTCGCCGATGATGTGACTGAACGTCGAAAAGTAA
ACGAAGACTACACTCCTGTGATTGTGTCTGACTTCGAGCTGGAAGGGGGTAAATCAGTCGCTTGGCTAGGTGCACCAATT
GTTCAGCAAGGTTATCTACACAGCTATGCCATGTTCCGCTTGCCAAATAATGGCATCACTAAGTTAGCCGCAGACGCTAA
TCGAGAGTCATCCATTAACACCCTGCTGGTTGGAAATGATCACCAACCTCGCACAATTAACACGAAACAAGACGACATTA
AGAACAGTTTAGAAGTGATCGATAAAGCACTCTCTGGTGCGTTTGGTGTCGGCACTTACACGAACGGCTTAGGTGAAGAA
ATCATCGCGGCTTATGCACCGATTGAAACTCGTGGTGTGATTTGGGCGCTCGTCGTACAGTTACCAGAAAACGAAGCTTT
CGCTCGTATCCATCAACTCGAAAAACTATTCGTTATCGCTATGTTGATCGCCATTATCCTTGTGGTGATAGCTTCTCACT
ATTTATCAAACTTTATCACTTCTCCGTTGCTGAAATTGACTTGGGTTGCCGAAAAGGTCTCTGCAGGGGATCTTGATGAC
ACGTCTTTTAATACGGTTCGTAAAGATGAAATTGGTCGGCTTGCGTTAAGCTTTGAACGAATGCAACGCTCTATTCGAGA
GAAGATTCAAACCATTAAGAAGCAAAATGAAGAACTAGAAAGCAGCATACAGATCATTCAAAAACAGAATGAAGAACTGC
AATTGGCCGATAAATTAAAAGATGAATTCTTAGCCACGACTTCTCATGAACTTCGTACACCGTTACACGGCATGGTCGGG
ATTGCTGAAACCTTAGCGTCCGGCGCCAATGGTGCGATCCCCGCTAGCCAGAAATATCAGCTTGATATCATCATTAAAAG
TGGTCAGCGTCTCGCTAATCTAGTCGATGACTTGTTGGATTATCATAAAATGCGTTATGGAAGCATGGATATCCAGAAAT
CAGCAGTGAGTTTGGGCAGTGCAACACGATTGGTTTTAGAGCTTTCTAGCCATTTACTCGGAAGTAAAACCATCCGCATC
ATCAACCAAGTCCCAGCGGATTTAAAAGCAGTGTCAGCTGACCCGCAACGCCTTGAACAAGTGCTATATAACCTGATTGG
CAATGCGATTAAATACACCTCAGAAGGTAAAATTGTTATCTCCGCTAATGTGGTAGATGATCATGTACGCGTACAAGTCG
TGGATACTGGACAAGGAATTCCCGCAGAACAACTTGAACATATTTTTGAACCACTTATCCAAGCAGGGCAAGACGCGAGC
CGTTATCGTCAAGGTGCAGGACTTGGGCTCTCCATTAGCCGTCAATTGATCGAATTAATGGGAGGCTCGTTATACGTCAG
TAGCCAACCAATGGTCGGAACTACCTTCAGTTTCACTTTACCGCTCGCCAGTGAAGAAGAAATCCAAGCAACCCAGACTC
TAGCTGCGCACGGGCACTTCCAAATTCCTGAAGTTAATGTAGAGAACAGTGAAGACTTATCACTTCCAGAGAACCCAGAC
GGCCCGTTACTGTATGTTGCTGACGATGAACCAGTAAACTTACGCGTGCTTGAAAGCTTTTTACGTTTAGAGGGCTATCG
TGTGCGTACCGTCTCCGATGGGCCAGAAACGTTAGCGCTCGTCGAGCAAGAGAAGCCGGAACTTCTGTTATTGGATATCA
TGATGCCAGGCATGAGCGGCTACCAAGTTTGTAGTGAACTACGTGAAGCCTATGATCATGCCGAATTGCCAATCATTATG
CTCACCGCACTCAGTCAAACAGAAGATCGTGTAAGAGGTTTTGAAGCAGGAGCCAACGACTATTTATCGAAACCATTTAA
TAAACAAGAGTTGGCGGCACGTATCCAAGCGCATTTAACGGCAAGCAAAGCAGAAATGCGCCATATGGAAAACAAAGTGC
TAGAGTCTGAACTTAGACAGCGAGCAGTCGTTGAAGCAAGCTTACTTGAGACTCAAGGTCGTTTGTTGGAACAGCTAGAA
TCGGCTCCTGAAGCAATCATCTGTCTACGTGAAGACAAGCGTATTCGCTTTGCTAACGAAGCTGCTTGTAAGCTATTCAA
GCGTAGCTTAGAACAGCTAAAGCGCTCATCTGCTGATGAGCTGATTGCCCCTAAATATCTAACCGTCAAACAACCTCATT
ACTGTGGCAAGATTGATATCTATATTGAAGATATTCGTCAGAACATCGAAGCAGACATTCTTAAGCTCCCTGAAGGTTCA
GGGTTAGATATCATGTACATCTTTAATGTCGGCGGTGGAGCCAGTGCCGCTCGCATACATAATCTAGAAACCGCCGTAGA
AGTGCTTTCAAGTTATGCATTTGATGGTGACAAAGACCAATTACAAAAGCTAAAAGAGCTTGGCGGAGAATTTACGCGCC
TTGCAGACAAAGCGCTCGGTAATAAAAAAGACAAGCAAGAACTTATGCGAGAAGTTCTAGTAGACGCAATGACACATGCT
TTAGAGTATTGGGAATCTGTAACGGGTGAAAGTAAGTTCGCATTTGCAGAGCAAAGTGGCTTGTGGCGCGTTTATCTAGA
CCGTAGTACTTTGCAAACACGCACTTTAGATAAATACATGCGTATAGAAACATTACCCAAAACACCACGTTGGAGAACGG
TGCTAAGCTCGATAGAGTTCATTCTCGAACACTGCAAAGAACAGAGCCCCGAGAGAGCATACATAGAAGCACAACGAGAT
AAACTACAGCGACTATTGACCAGCTAA

Domains

Predicted by InterproScan.

• PAS fold (PAS) (876-924)

• HAMP domain (HAMP) (375-427)

• Response regulator receiver domain (Response_reg) (726-836)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.262	100	0.763