Detailed information NTG0856426

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V9Z42_RS00935
• Genome accession: NZ_CP146663
• Coordinates: 191834..192817 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS 110-3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 186834..197817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9Z42_RS00920 (V9Z42_00920)	dppA	188134..189741 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
V9Z42_RS00925 (V9Z42_00925)	dppB	189892..190911 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V9Z42_RS00930 (V9Z42_00930)	dppC	190921..191823 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V9Z42_RS00935 (V9Z42_00935)	amiE	191834..192817 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
V9Z42_RS00940 (V9Z42_00940)	dppF	192814..193818 (+)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V9Z42_RS00945 (V9Z42_00945)	yhjV	193848..195119 (-)	1272	WP_001332306.1	aromatic amino acid transport family protein	-
V9Z42_RS00950 (V9Z42_00950)	-	195595..195702 (+)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
V9Z42_RS00955 (V9Z42_00955)	-	196077..196184 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V9Z42_RS00960 (V9Z42_00960)	-	196560..196667 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=856426 V9Z42_RS00935 WP_001196477.1 191834..192817(+) (amiE) [Escherichia coli strain MS 110-3]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=856426 V9Z42_RS00935 WP_001196477.1 191834..192817(+) (amiE) [Escherichia coli strain MS 110-3]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTAAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404