Detailed information NTG0856343

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V9Z45_RS00850
• Genome accession: NZ_CP146660
• Coordinates: 181538..182521 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain MS 57-2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 176538..187521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V9Z45_RS00835 (V9Z45_00835)	dppA	177682..179289 (+)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-
V9Z45_RS00840 (V9Z45_00840)	dppB	179596..180615 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V9Z45_RS00845 (V9Z45_00845)	dppC	180625..181527 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V9Z45_RS00850 (V9Z45_00850)	amiE	181538..182521 (+)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
V9Z45_RS00855 (V9Z45_00855)	dppF	182518..183522 (+)	1005	WP_000103570.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V9Z45_RS00860 (V9Z45_00860)	yhjV	183552..184823 (-)	1272	WP_001298005.1	aromatic amino acid transport family protein	-
V9Z45_RS00865 (V9Z45_00865)	ldrD	185299..185406 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V9Z45_RS00870 (V9Z45_00870)	bcsG	185492..187171 (-)	1680	WP_000191567.1	cellulose biosynthesis protein BcsG	-
V9Z45_RS00875 (V9Z45_00875)	bcsF	187168..187359 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=856343 V9Z45_RS00850 WP_001196477.1 181538..182521(+) (amiE) [Escherichia coli strain MS 57-2]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=856343 V9Z45_RS00850 WP_001196477.1 181538..182521(+) (amiE) [Escherichia coli strain MS 57-2]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404