Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | QY062_RS04175 | Genome accession | NZ_CP129891 |
| Coordinates | 803643..804695 (+) | Length | 350 a.a. |
| NCBI ID | WP_013059177.1 | Uniprot ID | A0A8D4BHW7 |
| Organism | Priestia megaterium strain ZS-3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 798643..809695
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QY062_RS04140 (QY062_04140) | - | 799210..799416 (+) | 207 | WP_013059184.1 | YqgQ family protein | - |
| QY062_RS04145 (QY062_04145) | - | 799419..800387 (+) | 969 | WP_013059183.1 | ROK family glucokinase | - |
| QY062_RS04150 (QY062_04150) | - | 800499..801401 (+) | 903 | WP_013059182.1 | M14 family metallocarboxypeptidase | - |
| QY062_RS04155 (QY062_04155) | - | 801437..801613 (-) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| QY062_RS04160 (QY062_04160) | - | 801822..802454 (+) | 633 | WP_013059180.1 | MBL fold metallo-hydrolase | - |
| QY062_RS04165 (QY062_04165) | - | 802492..802728 (-) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| QY062_RS04170 (QY062_04170) | - | 802990..803373 (+) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| QY062_RS04175 (QY062_04175) | comGA | 803643..804695 (+) | 1053 | WP_013059177.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QY062_RS04180 (QY062_04180) | comGB | 804686..805732 (+) | 1047 | WP_013059176.1 | competence type IV pilus assembly protein ComGB | - |
| QY062_RS04185 (QY062_04185) | comGC | 805747..806058 (+) | 312 | WP_013059175.1 | competence type IV pilus major pilin ComGC | - |
| QY062_RS04190 (QY062_04190) | comGD | 806045..806482 (+) | 438 | WP_013059174.1 | competence type IV pilus minor pilin ComGD | - |
| QY062_RS04195 (QY062_04195) | - | 806466..806804 (+) | 339 | WP_063672683.1 | type II secretion system protein | - |
| QY062_RS04200 (QY062_04200) | comGF | 806801..807238 (+) | 438 | WP_057274025.1 | competence type IV pilus minor pilin ComGF | - |
| QY062_RS04205 (QY062_04205) | comGG | 807228..807602 (+) | 375 | WP_013059171.1 | competence type IV pilus minor pilin ComGG | - |
| QY062_RS04210 (QY062_04210) | - | 807646..807831 (+) | 186 | WP_013059170.1 | YqzE family protein | - |
| QY062_RS04215 (QY062_04215) | - | 807856..808680 (-) | 825 | WP_013059169.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39625.02 Da Isoelectric Point: 9.0586
>NTDB_id=856302 QY062_RS04175 WP_013059177.1 803643..804695(+) (comGA) [Priestia megaterium strain ZS-3]
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=856302 QY062_RS04175 WP_013059177.1 803643..804695(+) (comGA) [Priestia megaterium strain ZS-3]
TTGACCGAAATTGAACAGTTTGCTACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACCCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACACACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGGTCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCACTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGGGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGTGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTGATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACCCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACACACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACCGGTCCTACAGGGTCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCACTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGGGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGTGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTGATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |