Detailed information NTG0856087

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: Q0F97_RS05350
• Genome accession: NZ_CP129878
• Coordinates: 1110260..1111303 (+)
• Length: 347 a.a.
• NCBI ID: WP_014124890.1
• Uniprot ID: A0A2H6DQ50
• Organism: Tetragenococcus halophilus strain H2
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1105260..1116303

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q0F97_RS05325 (Q0F97_05310)	-	1107343..1108458 (+)	1116	WP_252922609.1	CAP-associated domain-containing protein	-
Q0F97_RS05330 (Q0F97_05315)	-	1108455..1108880 (+)	426	WP_061840466.1	YlbF family regulator	-
Q0F97_RS05335 (Q0F97_05320)	-	1108870..1109184 (+)	315	WP_252922610.1	YlbG family protein	-
Q0F97_RS05340 (Q0F97_05325)	rsmD	1109219..1109773 (+)	555	WP_252922611.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
Q0F97_RS05345 (Q0F97_05330)	coaD	1109776..1110270 (+)	495	WP_014124891.1	pantetheine-phosphate adenylyltransferase	-
Q0F97_RS05350 (Q0F97_05335)	sepM	1110260..1111303 (+)	1044	WP_014124890.1	SepM family pheromone-processing serine protease	Regulator
Q0F97_RS05355 (Q0F97_05340)	-	1111406..1111789 (+)	384	WP_014124889.1	DUF1149 family protein	-
Q0F97_RS05360 (Q0F97_05345)	-	1111803..1112174 (+)	372	WP_014124888.1	VOC family protein	-
Q0F97_RS05365 (Q0F97_05350)	-	1112204..1112938 (+)	735	WP_014124887.1	metallophosphoesterase	-
Q0F97_RS05370 (Q0F97_05355)	-	1113018..1115195 (+)	2178	WP_170157593.1	Tex family protein	-
Q0F97_RS05375 (Q0F97_05360)	-	1115192..1115653 (+)	462	WP_014124885.1	SprT family protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38257.23 Da
• Isoelectric Point: 4.5199

>NTDB_id=856087 Q0F97_RS05350 WP_014124890.1 1110260..1111303(+) (sepM) [Tetragenococcus halophilus strain H2]
MKRDSLKKTLILLIIALAIFASVFLPLPYYIEKPGSTIELKDLITVNDKKDQEDGSFSLTSVGVQQASVVTAIKAKISPF
EELVSEEDLFGGASGEEYDQMQNYYMESSQNAAIQQALKLAKRPYNFEYKGVYVMNVMENSSFNGKIDVGDTVTKVDGKS
FDNNQDFMDYVQQKSIGDTVKVTYEHNDKTKKASGKLVELPSNQKAGIGITLVDHTDITSKDDIDFDVEDIGGPSAGLMF
TLEIYEQLTEEDLRKGKDIAGTGTIDEKGKVGRISGIDKKVASADEAGAQIFFAPNDTISKKVLKKNPGLKSNYQEAKET
ADSLDTDMKIVPVKTLQDAIDYLKQMD

Nucleotide

• Length: 1044 bp

>NTDB_id=856087 Q0F97_RS05350 WP_014124890.1 1110260..1111303(+) (sepM) [Tetragenococcus halophilus strain H2]
ATGAAGCGTGATTCTTTAAAAAAAACGTTAATACTTTTGATCATTGCACTCGCTATTTTCGCGAGTGTCTTTTTACCTTT
ACCCTATTATATTGAAAAGCCCGGTTCTACAATTGAACTTAAAGATTTAATCACTGTTAATGATAAAAAAGACCAGGAAG
ATGGTTCTTTTTCCCTAACTTCGGTAGGTGTTCAGCAGGCTTCAGTTGTTACAGCAATAAAAGCAAAGATTTCTCCTTTT
GAAGAATTGGTTTCAGAAGAAGATCTTTTCGGTGGGGCGAGTGGTGAAGAATATGATCAGATGCAAAATTATTATATGGA
ATCCTCGCAAAACGCAGCGATTCAACAAGCGCTAAAGTTGGCAAAGCGCCCTTATAACTTTGAGTATAAGGGTGTTTATG
TGATGAATGTGATGGAAAATTCGAGCTTTAATGGAAAAATAGATGTTGGTGACACAGTAACGAAAGTCGATGGAAAAAGC
TTTGATAATAACCAGGATTTTATGGATTATGTTCAGCAAAAGTCAATTGGTGACACTGTAAAAGTAACTTATGAACATAA
TGATAAAACAAAGAAAGCTAGTGGCAAGCTGGTAGAACTACCAAGTAATCAAAAAGCAGGAATCGGCATTACTTTAGTAG
ATCACACAGATATTACTTCAAAAGACGATATTGATTTTGATGTAGAGGATATTGGCGGACCTTCTGCTGGTTTAATGTTT
ACACTAGAAATTTATGAACAACTGACTGAAGAAGATTTGAGAAAAGGAAAAGATATCGCAGGAACAGGTACCATTGATGA
AAAAGGCAAAGTCGGGCGAATCAGTGGTATTGACAAAAAAGTGGCCAGCGCAGATGAAGCAGGTGCGCAAATCTTTTTTG
CGCCCAATGATACAATAAGTAAAAAAGTATTAAAGAAAAACCCCGGCTTAAAATCTAACTATCAGGAAGCTAAAGAGACA
GCTGATAGTTTAGATACGGACATGAAAATCGTTCCGGTAAAAACCTTACAAGATGCTATTGATTATTTAAAACAGATGGA
TTAA

Domains

Predicted by InterproScan.

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (233-298)

• PDZ domain (PDZ_2) (130-194)

3D structure

• AlphaFold DB: A0A2H6DQ50

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	50.149	96.542	0.484