Detailed information    

insolico Bioinformatically predicted

Overview

Name   sepM   Type   Regulator
Locus tag   QZN14_RS02640 Genome accession   NZ_CP129875
Coordinates   471748..472821 (+) Length   357 a.a.
NCBI ID   WP_000790649.1    Uniprot ID   A0AB38VS22
Organism   Streptococcus agalactiae COH1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context

Location: 466748..477821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZN14_RS02610 - 467639..468703 (+) 1065 WP_000021310.1 MmcQ/YjbR family DNA-binding protein -
  QZN14_RS02615 asnA 468818..469810 (+) 993 WP_000748010.1 aspartate--ammonia ligase -
  QZN14_RS02620 - 469855..470304 (-) 450 WP_000592264.1 bacteriocin transport accessory protein -
  QZN14_RS02625 rsmD 470435..470974 (+) 540 WP_001873924.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  QZN14_RS02630 - 470986..471276 (+) 291 WP_000384889.1 hypothetical protein -
  QZN14_RS02635 coaD 471273..471758 (+) 486 WP_000161888.1 pantetheine-phosphate adenylyltransferase -
  QZN14_RS02640 sepM 471748..472821 (+) 1074 WP_000790649.1 SepM family pheromone-processing serine protease Regulator
  QZN14_RS02645 - 472896..474230 (+) 1335 WP_000137524.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  QZN14_RS02650 - 474299..474877 (+) 579 WP_001224500.1 YutD-like domain-containing protein -
  QZN14_RS02655 rlmN 474928..476034 (+) 1107 WP_001124996.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  QZN14_RS02660 - 476034..476549 (+) 516 WP_000919737.1 VanZ family protein -

Sequence

Protein


Download         Length: 357 a.a.        Molecular weight: 39145.34 Da        Isoelectric Point: 10.4286

>NTDB_id=855984 QZN14_RS02640 WP_000790649.1 471748..472821(+) (sepM) [Streptococcus agalactiae COH1]
MKNKDPKRKHKSLLGLLKWWIIGFAFLLLVLASLVVRLPYYLEMPGGAYDIRSVLKVNKKADKAKGSYNFVAVSVSQATP
AQVLYAWLTPFTELSSKEETTGGFSNDDYLRINQFYMETSQNESIYQALKLANKQVSLTYKGVYVLNLAKNSTFKDRLHL
ADTVTGVNGKSFKNSSQLIKYVAALHLGDKVKVQYTSQGKKKESVGKVIKLSNGKNGIGIGLTDHTEVSSDVPVDFNTEG
VGGPSAGLMFTLAIYDQLVKEDLRKGRKIAGTGTIEQNGHVGDIGGAGLKVVSAAKKGMDIFFVPNNPIDKNAKKGKTKV
QTNYQEAKAAAKRLGTKMKIVPVQNVQQAIDYLKKTK

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=855984 QZN14_RS02640 WP_000790649.1 471748..472821(+) (sepM) [Streptococcus agalactiae COH1]
GTGAAGAATAAAGATCCAAAAAGAAAACATAAAAGTTTGCTAGGTCTGCTTAAATGGTGGATTATAGGTTTTGCTTTTTT
ATTGTTAGTATTAGCAAGCCTTGTGGTGAGGCTACCTTATTATTTGGAAATGCCAGGTGGAGCTTATGATATCCGTTCGG
TATTGAAAGTGAATAAAAAGGCTGATAAAGCTAAGGGTTCGTACAATTTTGTAGCGGTATCTGTCAGTCAAGCAACGCCA
GCTCAGGTTCTTTATGCTTGGTTAACTCCTTTTACAGAATTATCTAGTAAAGAGGAGACAACAGGTGGCTTTAGTAATGA
CGATTATCTCAGAATTAATCAATTCTACATGGAGACTTCTCAAAATGAGTCCATCTATCAAGCTTTAAAGTTAGCTAATA
AGCAAGTATCTCTTACTTATAAAGGAGTTTATGTGCTTAACTTAGCTAAAAATTCGACATTTAAAGATAGATTACATTTA
GCTGATACAGTCACAGGAGTTAATGGCAAAAGTTTCAAAAATTCTTCTCAACTTATCAAATATGTTGCAGCTCTTCATCT
AGGTGATAAAGTAAAGGTACAATACACAAGTCAAGGTAAAAAGAAAGAATCAGTTGGTAAAGTTATTAAACTATCAAACG
GTAAAAATGGTATTGGTATCGGTTTGACAGACCATACAGAAGTATCATCTGATGTTCCTGTGGACTTTAATACTGAAGGT
GTTGGAGGACCAAGTGCAGGTTTAATGTTTACTTTAGCGATTTACGACCAATTAGTTAAAGAAGATTTACGTAAAGGACG
TAAGATTGCAGGCACTGGTACTATTGAGCAAAATGGGCATGTTGGCGATATTGGTGGAGCAGGTTTGAAAGTTGTTTCAG
CGGCTAAAAAAGGAATGGATATTTTCTTTGTTCCTAATAATCCGATCGATAAAAATGCTAAAAAAGGCAAAACAAAGGTT
CAGACGAATTATCAAGAGGCAAAAGCAGCAGCTAAGCGATTAGGTACGAAGATGAAAATTGTACCAGTTCAAAATGTTCA
GCAAGCTATTGATTATTTGAAAAAAACAAAATAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(137-203)

Lon protease (S16) C-terminal proteolytic domain (Lon_C)

(241-307)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.322

94.958

0.658