Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   QZN14_RS02140 Genome accession   NZ_CP129875
Coordinates   383414..384139 (+) Length   241 a.a.
NCBI ID   WP_000912314.1    Uniprot ID   A0AAW6XYE4
Organism   Streptococcus agalactiae COH1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 378414..389139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QZN14_RS02105 tsaE 379216..379659 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QZN14_RS02110 - 379652..380173 (+) 522 WP_000043149.1 GNAT family N-acetyltransferase -
  QZN14_RS02115 - 380182..381489 (+) 1308 WP_000708161.1 LCP family protein -
  QZN14_RS02120 - 381553..381849 (-) 297 WP_000690175.1 hypothetical protein -
  QZN14_RS02125 - 381846..382265 (-) 420 WP_000368099.1 HIT family protein -
  QZN14_RS02130 - 382601..383104 (+) 504 WP_000773459.1 hypothetical protein -
  QZN14_RS02135 - 383156..383342 (-) 187 Protein_348 hypothetical protein -
  QZN14_RS02140 pptA 383414..384139 (+) 726 WP_000912314.1 ABC transporter ATP-binding protein Regulator
  QZN14_RS02145 - 384141..385175 (+) 1035 WP_000732710.1 ABC transporter permease -
  QZN14_RS02150 ccrZ 385233..386033 (+) 801 WP_000155920.1 cell cycle regulator CcrZ -
  QZN14_RS02155 trmB 386023..386658 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  QZN14_RS02165 rimP 387147..387623 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  QZN14_RS02170 nusA 387659..388810 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  QZN14_RS02175 - 388832..389128 (+) 297 WP_001140526.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26834.27 Da        Isoelectric Point: 4.6310

>NTDB_id=855983 QZN14_RS02140 WP_000912314.1 383414..384139(+) (pptA) [Streptococcus agalactiae COH1]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEANQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=855983 QZN14_RS02140 WP_000912314.1 383414..384139(+) (pptA) [Streptococcus agalactiae COH1]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACCATTGATGGCATTAGTCTTGAAGCCAACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGAGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATCTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763