Detailed information NTG0855983

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V8947_RS20655
• Genome accession: NZ_CP146595
• Coordinates: 3888392..3889375 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli strain A1.S1.18
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3883392..3894375

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V8947_RS20630 (V8947_20630)	-	3884542..3884649 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V8947_RS20635 (V8947_20635)	-	3885025..3885132 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
V8947_RS20640 (V8947_20640)	-	3885507..3885614 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V8947_RS20645 (V8947_20645)	yhjV	3886090..3887361 (+)	1272	WP_001296513.1	aromatic amino acid transport family protein	-
V8947_RS20650 (V8947_20650)	dppF	3887391..3888395 (-)	1005	WP_000103571.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V8947_RS20655 (V8947_20655)	amiE	3888392..3889375 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
V8947_RS20660 (V8947_20660)	dppC	3889386..3890288 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V8947_RS20665 (V8947_20665)	dppB	3890298..3891317 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V8947_RS20670 (V8947_20670)	dppA	3891624..3893231 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=855983 V8947_RS20655 WP_001196477.1 3888392..3889375(-) (amiE) [Escherichia coli strain A1.S1.18]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=855983 V8947_RS20655 WP_001196477.1 3888392..3889375(-) (amiE) [Escherichia coli strain A1.S1.18]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCTGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAAGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATTATCGAACTGCTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATTATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404