NTDB

Overview

Name	comYH	Type	Machinery gene
Locus tag	QZN14_RS01120	Genome accession	NZ_CP129875
Coordinates	192540..193514 (+)	Length	324 a.a.
NCBI ID	WP_001008572.1	Uniprot ID	-
Organism	Streptococcus agalactiae COH1
Function	dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 187540..198514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QZN14_RS01095	-	189326..189691 (+)	366	WP_000285373.1	DUF1033 family protein	-
QZN14_RS01100	comGA	189863..190834 (+)	972	Protein_163	competence type IV pilus ATPase ComGA	-
QZN14_RS01105	comYB	190728..191771 (+)	1044	WP_223297804.1	competence type IV pilus assembly protein ComGB	Machinery gene
QZN14_RS01110	comGF	191796..192224 (+)	429	WP_223842274.1	competence type IV pilus minor pilin ComGF	-
QZN14_RS01115	comGG	192202..192425 (+)	224	Protein_166	competence type IV pilus minor pilin ComGG	-
QZN14_RS01120	comYH	192540..193514 (+)	975	WP_001008572.1	class I SAM-dependent methyltransferase	Machinery gene
QZN14_RS01125	-	193546..194739 (+)	1194	WP_000047534.1	acetate kinase	-
QZN14_RS01130	-	194890..195096 (+)	207	WP_000798241.1	helix-turn-helix transcriptional regulator	-
QZN14_RS01135	-	195155..195292 (+)	138	WP_001869149.1	hypothetical protein	-
QZN14_RS01140	-	195333..195788 (+)	456	WP_000905672.1	hypothetical protein	-
QZN14_RS01145	-	195857..196522 (+)	666	WP_000008107.1	type II CAAX endopeptidase family protein	-
QZN14_RS01150	proC	196543..197313 (-)	771	WP_001869147.1	pyrroline-5-carboxylate reductase	-
QZN14_RS01155	pepA	197383..198450 (-)	1068	WP_001281321.1	glutamyl aminopeptidase	-

Sequence

Protein

Download Length: 324 a.a. Molecular weight: 37115.02 Da Isoelectric Point: 4.4041

                                >NTDB_id=855977 QZN14_RS01120 WP_001008572.1 192540..193514(+) (comYH) [Streptococcus agalactiae COH1]

MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT

EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS

AQFIQEDAVRPQILKESDVIISDLPVGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLVPENLLTSPQ

SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK

NMIE

Nucleotide

Download Length: 975 bp

                                >NTDB_id=855977 QZN14_RS01120 WP_001008572.1 192540..193514(+) (comYH) [Streptococcus agalactiae COH1]

ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA

TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC

AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA

GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG

TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG

AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT

GCCCAATTTATCCAAGAGGATGCCGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAGTTGG

CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA

TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGTACCCGAAAACCTTTTAACAAGTCCACAA

AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG

TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG

ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA

AATATGATAGAATAG

Domains

Predicted by InterproScan.

N-6 DNA Methylase (N6_Mtase)

(70-303)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
comYH	Streptococcus mutans UA159	66.984	97.222	0.651
comYH	Streptococcus mutans UA140	66.984	97.222	0.651

Detailed information NTG0855977