Detailed information NTG0855553

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V8955_RS13975
• Genome accession: NZ_CP146564
• Coordinates: 2731790..2732773 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain B1.H1.18
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2726790..2737773

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V8955_RS13955 (V8955_13955)	-	2728422..2728529 (-)	108	WP_000170736.1	type I toxin-antitoxin system toxin Ldr family protein	-
V8955_RS13960 (V8955_13960)	-	2728905..2729012 (-)	108	WP_000170743.1	type I toxin-antitoxin system toxin Ldr family protein	-
V8955_RS13965 (V8955_13965)	yhjV	2729488..2730759 (+)	1272	WP_001309838.1	aromatic amino acid transport family protein	-
V8955_RS13970 (V8955_13970)	dppF	2730789..2731793 (-)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V8955_RS13975 (V8955_13975)	amiE	2731790..2732773 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V8955_RS13980 (V8955_13980)	dppC	2732784..2733686 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V8955_RS13985 (V8955_13985)	dppB	2733696..2734715 (-)	1020	WP_000938865.1	dipeptide ABC transporter permease DppB	-
V8955_RS13990 (V8955_13990)	dppA	2734866..2736473 (-)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=855553 V8955_RS13975 WP_001196486.1 2731790..2732773(-) (amiE) [Escherichia coli strain B1.H1.18]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=855553 V8955_RS13975 WP_001196486.1 2731790..2732773(-) (amiE) [Escherichia coli strain B1.H1.18]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAGCTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404