Detailed information NTG0855450

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V8957_RS04115
• Genome accession: NZ_CP146556
• Coordinates: 894148..895131 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain B1.H1.39
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 889148..900131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V8957_RS04100 (V8957_04100)	dppA	890448..892055 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
V8957_RS04105 (V8957_04105)	dppB	892206..893225 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
V8957_RS04110 (V8957_04110)	dppC	893235..894137 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V8957_RS04115 (V8957_04115)	amiE	894148..895131 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
V8957_RS04120 (V8957_04120)	dppF	895128..896132 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V8957_RS04125 (V8957_04125)	yhjV	896162..897433 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
V8957_RS04130 (V8957_04130)	-	897909..898016 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V8957_RS04135 (V8957_04135)	-	898393..898500 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
V8957_RS04140 (V8957_04140)	-	898876..898983 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=855450 V8957_RS04115 WP_001196487.1 894148..895131(+) (amiE) [Escherichia coli strain B1.H1.39]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=855450 V8957_RS04115 WP_001196487.1 894148..895131(+) (amiE) [Escherichia coli strain B1.H1.39]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407