Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | V8690_RS35350 | Genome accession | NZ_CP146350 |
| Coordinates | 7600850..7603381 (-) | Length | 843 a.a. |
| NCBI ID | WP_338784124.1 | Uniprot ID | - |
| Organism | Streptomyces sp. DG1A-41 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 7595850..7608381
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| V8690_RS35335 (V8690_35335) | - | 7596427..7597995 (-) | 1569 | WP_338784121.1 | CocE/NonD family hydrolase | - |
| V8690_RS35340 (V8690_35340) | - | 7598112..7598867 (-) | 756 | WP_338784122.1 | hypothetical protein | - |
| V8690_RS35345 (V8690_35345) | ggt | 7598972..7600777 (+) | 1806 | WP_338784123.1 | gamma-glutamyltransferase | - |
| V8690_RS35350 (V8690_35350) | clpC | 7600850..7603381 (-) | 2532 | WP_338784124.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| V8690_RS35355 (V8690_35355) | map | 7603577..7604344 (-) | 768 | WP_338784125.1 | type I methionyl aminopeptidase | - |
| V8690_RS35360 (V8690_35360) | - | 7604378..7604629 (+) | 252 | WP_338784126.1 | helix-turn-helix transcriptional regulator | - |
| V8690_RS35365 (V8690_35365) | - | 7604754..7607084 (+) | 2331 | WP_338784127.1 | hypothetical protein | - |
| V8690_RS35370 (V8690_35370) | - | 7607255..7608097 (+) | 843 | WP_338784128.1 | nitrilase-related carbon-nitrogen hydrolase | - |
Sequence
Protein
Download Length: 843 a.a. Molecular weight: 92524.63 Da Isoelectric Point: 5.0780
>NTDB_id=855186 V8690_RS35350 WP_338784124.1 7600850..7603381(-) (clpC) [Streptomyces sp. DG1A-41]
MSSGFTSPEGYGSDPFGEFLARFFGGPRPGPRQIDIGRLLSQPARELVRGAAQYAAEHGSRDLDTEHLLRAALATEPTRT
LLSKAGANPDSLASQIDERSGPAQHTPDDTPPPTALSLTPAAKRALLDAHDMARARGYGYIGPEHVLSALASNPDSAAGH
ILNAARFAPSSPPEAPEPPQAERPRPTNTPTLDKYGRDLTELARQGRIDPVIGRDQEIEQTVEVLSRRGKNNPVLIGDAG
VGKTAIVEGLAQRISEGDVPDVLTGRRVVALDLTGVVAGTRYRGDFEERMNNIVGEIRAHSDQLIIFIDELHTVVGAGAG
GGDGSSMDAGNILKPALARGELHIAGATTLEEYRRIEKDAALARRFQPIMVPEPTAADAIEILRGLQDRYEAHHQVRYTD
EALVAAVELSDRYLTDRRLPDKAIDLIDQAGARVRLRARTKGTDVRTMERELEQLTRDKDQAVADEQYEQATQLRDRIMD
LKLRITQAGGDHEIDEGQDLVVEAEAIAEVVSRQTGIPVSSLTQEEKDRLLHLEEHLHERVVGQDEAVRVVSDAVLRSRA
GLASPDRPIGSFLFLGPTGVGKTELARALAEALFGSEDRMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRRH
PYSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEAITRRGASVGFASGGADADEEARREQ
ILRPLREHFRPEFLNRIDEIVVFRQLGTEQLRRITNLLLDRTRSLVRSKGISVTFTDRAVEWLAEHGYQPEYGARPLRRT
IQREVDNELSRLLLDGRVAEGGQVTVDTEDGHLTFRTETTATP
MSSGFTSPEGYGSDPFGEFLARFFGGPRPGPRQIDIGRLLSQPARELVRGAAQYAAEHGSRDLDTEHLLRAALATEPTRT
LLSKAGANPDSLASQIDERSGPAQHTPDDTPPPTALSLTPAAKRALLDAHDMARARGYGYIGPEHVLSALASNPDSAAGH
ILNAARFAPSSPPEAPEPPQAERPRPTNTPTLDKYGRDLTELARQGRIDPVIGRDQEIEQTVEVLSRRGKNNPVLIGDAG
VGKTAIVEGLAQRISEGDVPDVLTGRRVVALDLTGVVAGTRYRGDFEERMNNIVGEIRAHSDQLIIFIDELHTVVGAGAG
GGDGSSMDAGNILKPALARGELHIAGATTLEEYRRIEKDAALARRFQPIMVPEPTAADAIEILRGLQDRYEAHHQVRYTD
EALVAAVELSDRYLTDRRLPDKAIDLIDQAGARVRLRARTKGTDVRTMERELEQLTRDKDQAVADEQYEQATQLRDRIMD
LKLRITQAGGDHEIDEGQDLVVEAEAIAEVVSRQTGIPVSSLTQEEKDRLLHLEEHLHERVVGQDEAVRVVSDAVLRSRA
GLASPDRPIGSFLFLGPTGVGKTELARALAEALFGSEDRMVRLDMSEYQERHTVSRLVGAPPGYVGHEEAGQLTEVVRRH
PYSLLLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFTNTVIVMTSNLGSEAITRRGASVGFASGGADADEEARREQ
ILRPLREHFRPEFLNRIDEIVVFRQLGTEQLRRITNLLLDRTRSLVRSKGISVTFTDRAVEWLAEHGYQPEYGARPLRRT
IQREVDNELSRLLLDGRVAEGGQVTVDTEDGHLTFRTETTATP
Nucleotide
Download Length: 2532 bp
>NTDB_id=855186 V8690_RS35350 WP_338784124.1 7600850..7603381(-) (clpC) [Streptomyces sp. DG1A-41]
ATGAGCAGCGGCTTCACCAGCCCGGAGGGCTACGGCTCGGACCCCTTCGGAGAATTCCTCGCACGCTTCTTCGGCGGACC
GCGCCCGGGTCCCCGGCAGATCGACATCGGGCGGCTGCTCAGCCAGCCGGCCCGGGAGCTCGTCCGCGGAGCCGCCCAGT
ACGCCGCCGAGCACGGCAGCCGGGACCTCGACACGGAACACCTGCTGCGGGCGGCGCTCGCCACCGAACCCACCCGGACC
CTGCTCAGCAAGGCCGGCGCGAACCCCGACTCGCTGGCGTCGCAGATCGACGAGCGGTCGGGCCCGGCCCAGCACACCCC
GGACGACACACCGCCGCCGACCGCGCTCTCCCTCACCCCGGCCGCCAAGCGCGCCCTGCTGGACGCGCACGACATGGCCC
GGGCCCGCGGCTACGGCTACATCGGCCCGGAGCACGTGCTCAGCGCCCTGGCCTCGAACCCCGACTCGGCCGCCGGGCAC
ATCCTGAACGCGGCCCGCTTCGCCCCCTCCAGCCCGCCCGAGGCGCCGGAGCCCCCGCAGGCAGAGCGGCCGCGCCCGAC
GAACACGCCGACCCTCGACAAGTACGGCCGTGACCTCACCGAACTGGCCCGGCAGGGCCGTATCGACCCGGTGATCGGCC
GGGACCAGGAGATCGAGCAGACCGTCGAGGTCCTCTCCCGCCGCGGCAAGAACAACCCGGTGCTGATCGGTGACGCGGGC
GTCGGCAAGACCGCCATCGTGGAGGGGCTGGCGCAGCGCATCTCCGAGGGGGACGTGCCCGACGTGCTGACCGGGCGCCG
CGTGGTGGCCCTGGACCTGACGGGCGTGGTCGCGGGCACCCGCTACCGGGGTGACTTCGAGGAGCGGATGAACAACATCG
TCGGCGAGATCCGCGCCCACTCCGACCAGTTGATCATCTTCATCGACGAGCTGCACACGGTCGTGGGCGCCGGTGCCGGT
GGCGGCGACGGCAGTTCCATGGACGCCGGGAACATCCTCAAGCCGGCCCTCGCCCGCGGCGAGCTGCACATCGCGGGCGC
CACGACGCTGGAGGAGTACCGAAGGATCGAGAAGGACGCGGCGCTGGCCCGCCGCTTCCAACCGATCATGGTGCCGGAAC
CGACCGCTGCGGACGCGATCGAGATCCTGCGCGGCCTCCAGGACCGCTACGAGGCCCACCACCAGGTCCGCTACACCGAC
GAGGCCCTGGTCGCCGCCGTGGAGTTGTCCGACCGCTACCTCACCGACCGCCGGCTGCCGGACAAGGCGATCGACCTGAT
CGACCAGGCCGGTGCCCGGGTCCGGCTGCGCGCCCGCACCAAGGGCACCGACGTACGGACCATGGAACGGGAGCTGGAGC
AGCTGACCCGGGACAAGGACCAGGCGGTCGCGGACGAGCAGTACGAGCAGGCCACCCAGTTGCGCGACCGGATCATGGAC
CTGAAGCTGCGGATCACCCAGGCGGGCGGCGACCACGAGATCGACGAGGGCCAGGATCTGGTGGTCGAGGCCGAGGCGAT
CGCCGAGGTGGTGTCCCGGCAGACCGGCATCCCCGTCAGCAGCCTCACCCAGGAGGAGAAGGACCGCCTGCTGCACCTGG
AGGAGCATCTGCACGAGCGGGTGGTCGGCCAGGACGAGGCCGTGCGGGTCGTCTCGGACGCGGTGCTGCGCTCCCGCGCG
GGGCTGGCCAGCCCCGACCGGCCGATCGGCAGCTTCCTGTTCCTCGGCCCGACGGGCGTCGGCAAGACCGAGCTGGCCCG
GGCGCTCGCCGAGGCCCTGTTCGGCAGCGAGGACCGCATGGTCCGCCTCGACATGAGCGAGTACCAGGAGCGGCACACCG
TCAGCCGCCTGGTCGGCGCCCCGCCCGGCTACGTCGGCCACGAGGAGGCCGGCCAGCTCACCGAGGTCGTCCGCCGGCAC
CCGTACTCGCTGCTCCTGCTGGACGAGGTGGAGAAGGCCCACCCGGACGTCTTCAACATCCTGCTCCAGGTCCTCGACGA
CGGCCGCCTCACCGACTCGCAGGGCCGCACGGTCGACTTCACCAACACCGTCATCGTGATGACCAGCAACCTCGGCTCCG
AGGCGATCACCCGCCGCGGCGCCTCCGTGGGCTTCGCGTCGGGCGGTGCCGACGCGGACGAGGAGGCCCGGCGCGAACAG
ATCCTGCGGCCCCTGCGCGAGCACTTCCGCCCCGAGTTCCTCAACCGCATCGACGAGATCGTCGTCTTCCGCCAGCTCGG
CACGGAACAACTGCGCCGGATCACCAACCTCCTGCTGGACCGCACCAGGTCCCTGGTGCGGAGCAAGGGCATCTCGGTGA
CCTTCACCGACCGAGCGGTGGAATGGCTGGCCGAACACGGCTACCAGCCGGAGTACGGCGCCCGCCCGTTGCGCCGCACG
ATCCAGCGCGAGGTGGACAACGAGCTGTCCCGGCTCTTGCTGGACGGCCGGGTGGCGGAGGGCGGCCAGGTGACGGTGGA
CACCGAGGACGGCCACCTGACGTTCCGAACGGAGACGACGGCAACGCCCTGA
ATGAGCAGCGGCTTCACCAGCCCGGAGGGCTACGGCTCGGACCCCTTCGGAGAATTCCTCGCACGCTTCTTCGGCGGACC
GCGCCCGGGTCCCCGGCAGATCGACATCGGGCGGCTGCTCAGCCAGCCGGCCCGGGAGCTCGTCCGCGGAGCCGCCCAGT
ACGCCGCCGAGCACGGCAGCCGGGACCTCGACACGGAACACCTGCTGCGGGCGGCGCTCGCCACCGAACCCACCCGGACC
CTGCTCAGCAAGGCCGGCGCGAACCCCGACTCGCTGGCGTCGCAGATCGACGAGCGGTCGGGCCCGGCCCAGCACACCCC
GGACGACACACCGCCGCCGACCGCGCTCTCCCTCACCCCGGCCGCCAAGCGCGCCCTGCTGGACGCGCACGACATGGCCC
GGGCCCGCGGCTACGGCTACATCGGCCCGGAGCACGTGCTCAGCGCCCTGGCCTCGAACCCCGACTCGGCCGCCGGGCAC
ATCCTGAACGCGGCCCGCTTCGCCCCCTCCAGCCCGCCCGAGGCGCCGGAGCCCCCGCAGGCAGAGCGGCCGCGCCCGAC
GAACACGCCGACCCTCGACAAGTACGGCCGTGACCTCACCGAACTGGCCCGGCAGGGCCGTATCGACCCGGTGATCGGCC
GGGACCAGGAGATCGAGCAGACCGTCGAGGTCCTCTCCCGCCGCGGCAAGAACAACCCGGTGCTGATCGGTGACGCGGGC
GTCGGCAAGACCGCCATCGTGGAGGGGCTGGCGCAGCGCATCTCCGAGGGGGACGTGCCCGACGTGCTGACCGGGCGCCG
CGTGGTGGCCCTGGACCTGACGGGCGTGGTCGCGGGCACCCGCTACCGGGGTGACTTCGAGGAGCGGATGAACAACATCG
TCGGCGAGATCCGCGCCCACTCCGACCAGTTGATCATCTTCATCGACGAGCTGCACACGGTCGTGGGCGCCGGTGCCGGT
GGCGGCGACGGCAGTTCCATGGACGCCGGGAACATCCTCAAGCCGGCCCTCGCCCGCGGCGAGCTGCACATCGCGGGCGC
CACGACGCTGGAGGAGTACCGAAGGATCGAGAAGGACGCGGCGCTGGCCCGCCGCTTCCAACCGATCATGGTGCCGGAAC
CGACCGCTGCGGACGCGATCGAGATCCTGCGCGGCCTCCAGGACCGCTACGAGGCCCACCACCAGGTCCGCTACACCGAC
GAGGCCCTGGTCGCCGCCGTGGAGTTGTCCGACCGCTACCTCACCGACCGCCGGCTGCCGGACAAGGCGATCGACCTGAT
CGACCAGGCCGGTGCCCGGGTCCGGCTGCGCGCCCGCACCAAGGGCACCGACGTACGGACCATGGAACGGGAGCTGGAGC
AGCTGACCCGGGACAAGGACCAGGCGGTCGCGGACGAGCAGTACGAGCAGGCCACCCAGTTGCGCGACCGGATCATGGAC
CTGAAGCTGCGGATCACCCAGGCGGGCGGCGACCACGAGATCGACGAGGGCCAGGATCTGGTGGTCGAGGCCGAGGCGAT
CGCCGAGGTGGTGTCCCGGCAGACCGGCATCCCCGTCAGCAGCCTCACCCAGGAGGAGAAGGACCGCCTGCTGCACCTGG
AGGAGCATCTGCACGAGCGGGTGGTCGGCCAGGACGAGGCCGTGCGGGTCGTCTCGGACGCGGTGCTGCGCTCCCGCGCG
GGGCTGGCCAGCCCCGACCGGCCGATCGGCAGCTTCCTGTTCCTCGGCCCGACGGGCGTCGGCAAGACCGAGCTGGCCCG
GGCGCTCGCCGAGGCCCTGTTCGGCAGCGAGGACCGCATGGTCCGCCTCGACATGAGCGAGTACCAGGAGCGGCACACCG
TCAGCCGCCTGGTCGGCGCCCCGCCCGGCTACGTCGGCCACGAGGAGGCCGGCCAGCTCACCGAGGTCGTCCGCCGGCAC
CCGTACTCGCTGCTCCTGCTGGACGAGGTGGAGAAGGCCCACCCGGACGTCTTCAACATCCTGCTCCAGGTCCTCGACGA
CGGCCGCCTCACCGACTCGCAGGGCCGCACGGTCGACTTCACCAACACCGTCATCGTGATGACCAGCAACCTCGGCTCCG
AGGCGATCACCCGCCGCGGCGCCTCCGTGGGCTTCGCGTCGGGCGGTGCCGACGCGGACGAGGAGGCCCGGCGCGAACAG
ATCCTGCGGCCCCTGCGCGAGCACTTCCGCCCCGAGTTCCTCAACCGCATCGACGAGATCGTCGTCTTCCGCCAGCTCGG
CACGGAACAACTGCGCCGGATCACCAACCTCCTGCTGGACCGCACCAGGTCCCTGGTGCGGAGCAAGGGCATCTCGGTGA
CCTTCACCGACCGAGCGGTGGAATGGCTGGCCGAACACGGCTACCAGCCGGAGTACGGCGCCCGCCCGTTGCGCCGCACG
ATCCAGCGCGAGGTGGACAACGAGCTGTCCCGGCTCTTGCTGGACGGCCGGGTGGCGGAGGGCGGCCAGGTGACGGTGGA
CACCGAGGACGGCCACCTGACGTTCCGAACGGAGACGACGGCAACGCCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
47.853 |
96.679 |
0.463 |
| clpC | Streptococcus pneumoniae D39 |
44.79 |
99.051 |
0.444 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.79 |
99.051 |
0.444 |
| clpC | Streptococcus pneumoniae Rx1 |
44.79 |
99.051 |
0.444 |
| clpC | Streptococcus mutans UA159 |
43.78 |
99.17 |
0.434 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
45.149 |
95.374 |
0.431 |
| clpC | Streptococcus thermophilus LMD-9 |
46.552 |
89.442 |
0.416 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.286 |
89.442 |
0.414 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
50.597 |
79.478 |
0.402 |
| clpE | Streptococcus mutans UA159 |
53.365 |
74.021 |
0.395 |
| clpE | Streptococcus pneumoniae D39 |
50 |
78.529 |
0.393 |
| clpE | Streptococcus pneumoniae R6 |
50 |
78.529 |
0.393 |
| clpE | Streptococcus pneumoniae TIGR4 |
50 |
78.529 |
0.393 |
| clpE | Streptococcus pneumoniae Rx1 |
50 |
78.529 |
0.393 |