Detailed information NTG0085517

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: QUF17_RS19450
• Genome accession: NZ_AP027417
• Coordinates: 3289574..3290599 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain EC361 isolate EC361
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3284574..3295599

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUF17_RS19420 (MUTS5_37510)	zapB	3284658..3284903 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
QUF17_RS19425 (MUTS5_37520)	rraA	3284988..3285473 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
QUF17_RS19430 (MUTS5_37530)	menA	3285566..3286492 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
QUF17_RS19435 (MUTS5_37540)	hslU	3286559..3287890 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
QUF17_RS19440 (MUTS5_37550)	hslV	3287900..3288430 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
QUF17_RS19445 (MUTS5_37560)	ftsN	3288523..3289482 (-)	960	WP_000068834.1	cell division protein FtsN	-
QUF17_RS19450 (MUTS5_37570)	cytR	3289574..3290599 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
QUF17_RS19455 (MUTS5_37580)	priA	3290755..3292953 (-)	2199	WP_001348093.1	primosomal protein N'	Machinery gene
QUF17_RS19460 (MUTS5_37590)	rpmE	3293156..3293368 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=85517 QUF17_RS19450 WP_000644904.1 3289574..3290599(-) (cytR) [Escherichia coli strain EC361 isolate EC361]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=85517 QUF17_RS19450 WP_000644904.1 3289574..3290599(-) (cytR) [Escherichia coli strain EC361 isolate EC361]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTACTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628