Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   V8690_RS24740 Genome accession   NZ_CP146350
Coordinates   5283342..5284466 (-) Length   374 a.a.
NCBI ID   WP_338782153.1    Uniprot ID   -
Organism   Streptomyces sp. DG1A-41     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5278342..5289466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V8690_RS24720 (V8690_24720) - 5279044..5280621 (+) 1578 WP_338782145.1 histidine kinase -
  V8690_RS24725 (V8690_24725) - 5280618..5281328 (+) 711 WP_338782147.1 response regulator transcription factor -
  V8690_RS24730 (V8690_24730) - 5281390..5282031 (-) 642 WP_338782149.1 phosphatase PAP2 family protein -
  V8690_RS24735 (V8690_24735) - 5282207..5283064 (+) 858 WP_338782151.1 hypothetical protein -
  V8690_RS24740 (V8690_24740) disA 5283342..5284466 (-) 1125 WP_338782153.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  V8690_RS24745 (V8690_24745) radA 5284548..5285956 (-) 1409 Protein_4871 DNA repair protein RadA -
  V8690_RS24750 (V8690_24750) - 5286153..5287871 (+) 1719 WP_338782156.1 hypothetical protein -
  V8690_RS24755 (V8690_24755) - 5287933..5288733 (-) 801 WP_338782157.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 39966.66 Da        Isoelectric Point: 4.9201

>NTDB_id=855158 V8690_RS24740 WP_338782153.1 5283342..5284466(-) (disA) [Streptomyces sp. DG1A-41]
MAANDRASAPGKSGGSAGTDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVEALCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDALTHAELLELATVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=855158 V8690_RS24740 WP_338782153.1 5283342..5284466(-) (disA) [Streptomyces sp. DG1A-41]
GTGGCAGCCAACGACCGGGCATCGGCTCCCGGAAAGTCCGGCGGGAGTGCCGGTACCGATGGCCTGATGCGCGCCTCGCT
GAGTGCCGTGGCACCCGGCACCGCCCTGCGTGACGGCCTGGAGCGCGTGCTCCGCGGCAACACCGGCGGACTCATCGTCC
TCGGCTCCGACAAGACGGTAGAGGCGCTCTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGTCTGCGC
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCCTCGGACCTGTCGAAGATCCTTCGCGCGGGCGTGCAGCTGGTCCC
GGACCCGACGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGCGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCCCTGTACGTGGACGGCCAGCGCCGGGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACGTTGTC
GGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTCTCGGCGGTCGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTGGGCACGGACGGCCGGCTGCTGGCCCTCCAGCTCGACGAGCTGATCGCC
GGCGTGGAGCCCGAGCGCGAGCTGGTCGTCCGGGACTACGTCCCCGAACCCACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTGGCCGAGCTGGACGCCCTCACCCACGCCGAGCTCCTCGAACTGGCCACGGTGGCCCGGGCGTTGGGCTACACCG
GCTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGCCTGCTCGCCAAGGTGCCCCGGCTCCCCGGCGCG
ATCATCGACCGCCTGGTCGAGCACTTCGGCGGCCTCCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGGGCGCGCAGCGTCCGGGAGGGACTCTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441