NTDB

Overview

Name	clpC	Type	Regulator
Locus tag	V8690_RS23675	Genome accession	NZ_CP146350
Coordinates	5065801..5068422 (+)	Length	873 a.a.
NCBI ID	WP_338781852.1	Uniprot ID	-
Organism	Streptomyces sp. DG1A-41
Function	degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 5060801..5073422

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V8690_RS23640 (V8690_23640)	-	5060963..5061136 (+)	174	WP_338781839.1	hypothetical protein	-
V8690_RS23645 (V8690_23645)	-	5061454..5062497 (+)	1044	WP_338781841.1	LuxR C-terminal-related transcriptional regulator	-
V8690_RS23650 (V8690_23650)	-	5062460..5063449 (-)	990	WP_338781843.1	helix-turn-helix transcriptional regulator	-
V8690_RS23655 (V8690_23655)	-	5063446..5064477 (-)	1032	WP_338781845.1	helix-turn-helix transcriptional regulator	-
V8690_RS23660 (V8690_23660)	-	5064594..5064776 (+)	183	WP_338785433.1	hypothetical protein	-
V8690_RS23665 (V8690_23665)	-	5064778..5065113 (+)	336	WP_338781847.1	hypothetical protein	-
V8690_RS23670 (V8690_23670)	-	5065280..5065696 (-)	417	WP_338781849.1	TIGR03618 family F420-dependent PPOX class oxidoreductase	-
V8690_RS23675 (V8690_23675)	clpC	5065801..5068422 (+)	2622	WP_338781852.1	ATP-dependent chaperone ClpB	Regulator
V8690_RS23680 (V8690_23680)	-	5068959..5069162 (+)	204	WP_338781854.1	hypothetical protein	-
V8690_RS23685 (V8690_23685)	-	5069466..5069993 (+)	528	WP_010032094.1	YbjN domain-containing protein	-
V8690_RS23690 (V8690_23690)	-	5070104..5071297 (-)	1194	WP_338781859.1	pyridoxal phosphate-dependent aminotransferase	-
V8690_RS23695 (V8690_23695)	-	5072397..5072924 (+)	528	WP_338781861.1	DUF2617 family protein	-

Sequence

Protein

Download Length: 873 a.a. Molecular weight: 95272.89 Da Isoelectric Point: 4.7719

                                >NTDB_id=855151 V8690_RS23675 WP_338781852.1 5065801..5068422(+) (clpC) [Streptomyces sp. DG1A-41]

MDAELTNRSRDAINAASNRAVTEGHPDLTPAHLLLALLQGQDNENITDLLAAVDADQAAVRAGAERVLAGLPSVTGSTVA

PPQPNREMLAVVADAQARAKDLGDEYLSTEHLLIGIAAKGGAAGEVLSQQGAGARKLQDAFQKTRGARRVTTADPEGQYK

ALEKFGTDFTAAAREGKLDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVKGDVPESLKDKRLVA

LDLGAMVAGAKYRGEFEERLKTVLAEIRQSDGQIITFIDELHTVVGAGAGGDSAMDAGNMLKPMLARGELRMVGATTLDE

YRERIEKDAALERRFQQVLVSEPTVEDSIAILRGLKGRYEAHHKVQIADSALVAAATLSDRYITSRFLPDKAIDLVDEAA

SRLRMEIDSSPVEIDELQRAVDRLKMEELAIGKETDAASRERLEKLRRDLADKEEELRGLTARWEKEKQSLNRVGELKER

LDDLRGQAERAQRDGDFDTASKLLYGEIPALEKELEAASEAEEALTSSASGGGAKDTMVKEEVGADDIADVVASWTGIPA

GRLLEGETQKLLRMEDEIGKRLIGQTEAVRAVSDAVRRSRAGISDPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERA

MVRIDMSEYSEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVD

FRNTILVLTSNLGSQFLVDPLTSEAEKKEQVLEVVRTSFKPEFLNRLDDLVVFSALTKPELERIAKLQIERLAKRLAERR

LTLDITPEALAWLAEEGMDPAYGARPLRRLVQTAIGDRLAKEILSGEVKDGDTVRVDRVGDELLVERAAGKTL

Nucleotide

Download Length: 2622 bp

                                >NTDB_id=855151 V8690_RS23675 WP_338781852.1 5065801..5068422(+) (clpC) [Streptomyces sp. DG1A-41]

GTGGACGCCGAGCTGACCAACCGGAGCCGGGACGCGATCAACGCGGCCAGCAACCGGGCCGTGACCGAGGGGCACCCCGA

CCTCACCCCCGCCCACCTGCTCCTCGCGCTGCTCCAGGGGCAGGACAACGAGAACATCACCGATCTGCTCGCCGCGGTCG

ACGCCGACCAGGCGGCCGTACGCGCCGGAGCCGAGCGCGTGCTCGCCGGGCTGCCCAGCGTGACCGGGTCCACCGTGGCG

CCGCCCCAGCCCAACCGCGAGATGCTCGCCGTCGTCGCCGACGCGCAGGCCCGCGCCAAGGACCTCGGGGACGAGTACCT

CTCCACGGAGCACCTCCTCATCGGCATCGCCGCGAAGGGCGGCGCGGCCGGCGAGGTGCTGTCCCAGCAGGGCGCCGGCG

CCAGGAAGCTTCAGGACGCCTTCCAGAAGACGCGGGGAGCGCGCCGGGTGACCACGGCCGACCCCGAGGGCCAGTACAAG

GCCCTGGAGAAGTTCGGGACCGACTTCACCGCCGCCGCGCGGGAAGGGAAGCTCGATCCCGTCATCGGGCGGGACCAGGA

GATCCGGCGCGTGGTGCAGGTGCTGTCCCGCCGGACCAAGAACAACCCCGTGCTCATCGGTGAGCCCGGCGTCGGCAAGA

CCGCCGTCGTCGAAGGGCTCGCCCAGCGGATCGTCAAGGGGGACGTCCCGGAGTCCCTCAAGGACAAGCGGCTCGTCGCG

CTCGATCTGGGCGCCATGGTCGCCGGGGCCAAGTACCGGGGTGAGTTCGAGGAGCGGCTGAAGACCGTCCTTGCCGAGAT

CAGGCAATCCGACGGGCAGATCATCACCTTCATCGACGAGCTGCACACCGTCGTCGGTGCCGGTGCCGGCGGCGACTCCG

CCATGGACGCGGGCAACATGCTGAAGCCCATGCTCGCCCGCGGTGAGCTGCGCATGGTCGGTGCCACGACCCTCGACGAG

TACCGGGAGCGGATCGAGAAGGACGCCGCCCTGGAGCGGCGCTTCCAGCAGGTGCTGGTCTCCGAGCCGACCGTCGAGGA

CTCCATCGCGATCCTGCGCGGGCTCAAGGGCCGCTACGAGGCCCACCACAAGGTGCAGATCGCCGACAGCGCGCTGGTCG

CGGCCGCCACCCTCTCCGACCGGTACATCACCTCCCGCTTCCTGCCCGACAAGGCCATCGACCTCGTCGACGAGGCGGCC

TCCCGGCTGCGCATGGAGATCGACTCGTCCCCCGTCGAGATCGACGAACTCCAGCGCGCCGTGGACCGGCTGAAGATGGA

GGAGCTCGCGATCGGCAAGGAGACCGACGCGGCCTCCCGCGAGCGCCTGGAGAAGCTGCGCCGCGACCTCGCCGACAAGG

AGGAGGAGCTGCGCGGCCTCACCGCCCGCTGGGAGAAGGAGAAGCAGTCCCTCAACCGCGTCGGTGAGCTGAAGGAGCGC

CTCGACGACCTGCGCGGCCAGGCCGAACGCGCCCAGCGCGACGGCGACTTCGACACCGCCTCCAAGCTGCTCTACGGCGA

GATCCCCGCCCTGGAGAAGGAACTGGAGGCCGCCTCCGAGGCCGAGGAGGCGTTGACATCTTCCGCCTCCGGCGGGGGCG

CCAAGGACACCATGGTCAAGGAGGAGGTCGGCGCCGACGACATCGCCGACGTCGTCGCCTCCTGGACCGGCATCCCCGCC

GGGCGTCTGCTGGAGGGCGAGACGCAGAAGCTGCTCCGCATGGAGGACGAGATCGGCAAGCGGCTCATCGGCCAGACCGA

GGCCGTGCGGGCGGTCAGCGACGCCGTACGGCGGTCCCGCGCCGGGATCTCCGACCCCGACCGCCCCACCGGCTCCTTCC

TCTTCCTCGGCCCGACCGGCGTCGGCAAGACCGAGCTGGCCAAGGCCCTCGCCGACTTCCTCTTCGACGACGAGCGGGCG

ATGGTCCGCATCGACATGTCGGAGTACAGCGAGAAGCACAGCGTGGCCCGGCTGGTCGGTGCCCCGCCCGGATACGTCGG

CTACGAGGAGGGCGGCCAGCTCACGGAGGCGGTGCGCAGGCGGCCGTACTCCGTCATCCTGCTGGACGAGGTGGAGAAGG

CCCACCCCGAGGTCTTCGACATCCTGCTCCAGGTGCTCGACGACGGGCGTCTCACGGACGGCCAGGGCCGCACGGTCGAC

TTCCGCAACACCATCCTCGTCCTGACGTCGAACCTGGGCAGCCAGTTCCTGGTCGACCCGCTCACCAGTGAGGCGGAGAA

GAAGGAGCAGGTGCTGGAGGTGGTGCGGACGTCCTTCAAGCCGGAGTTCCTCAACCGCCTGGACGACCTGGTCGTCTTCT

CGGCCCTGACCAAGCCCGAGCTGGAGCGCATCGCGAAGCTCCAGATCGAGCGCCTCGCCAAGCGCCTCGCCGAGCGGCGC

CTCACCCTGGACATCACGCCCGAGGCCCTGGCCTGGCTCGCCGAGGAGGGCATGGACCCGGCGTACGGCGCGCGTCCGCT

GCGCCGCCTCGTCCAGACCGCCATCGGCGACCGCCTCGCCAAGGAGATCCTCTCCGGCGAGGTCAAGGACGGCGACACGG

TCCGCGTCGACCGTGTCGGTGACGAGCTCCTGGTGGAACGGGCGGCCGGCAAGACCCTCTGA