Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   WHT_RS06305 Genome accession   NZ_AP024504
Coordinates   1204570..1204746 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain HT18     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1199570..1209746
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHT_RS06285 (WHT_c12550) clpC 1199901..1202501 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  WHT_RS06290 (WHT_c12560) - 1202540..1202722 (-) 183 WP_001211116.1 YjzD family protein -
  WHT_RS06295 (WHT_c12570) - 1202879..1203613 (+) 735 WP_000028712.1 hydrolase -
  WHT_RS06300 (WHT_c12580) - 1203643..1204515 (+) 873 WP_065212159.1 NAD(P)-dependent oxidoreductase -
  WHT_RS06305 (WHT_c12590) comZ 1204570..1204746 (+) 177 WP_001986215.1 ComZ family protein Regulator
  WHT_RS06310 (WHT_c12600) fabH 1205135..1206067 (+) 933 WP_001100547.1 beta-ketoacyl-ACP synthase III -
  WHT_RS06315 (WHT_c12610) fabF 1206099..1207337 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  WHT_RS06320 (WHT_c12620) - 1207444..1208232 (+) 789 WP_000513277.1 DUF2268 domain-containing putative Zn-dependent protease -
  WHT_RS06325 (WHT_c12630) - 1208376..1209122 (+) 747 WP_000966127.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=85509 WHT_RS06305 WP_001986215.1 1204570..1204746(+) (comZ) [Bacillus cereus strain HT18]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=85509 WHT_RS06305 WP_001986215.1 1204570..1204746(+) (comZ) [Bacillus cereus strain HT18]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAGGCCTATGAGCTCGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment