Detailed information NTG0855031

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: V6M96_RS00940
• Genome accession: NZ_CP146250
• Coordinates: 203676..204659 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain L26
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 198676..209659

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V6M96_RS00925 (V6M96_00925)	dppA	199976..201583 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
V6M96_RS00930 (V6M96_00930)	dppB	201734..202753 (+)	1020	WP_000938853.1	dipeptide ABC transporter permease DppB	-
V6M96_RS00935 (V6M96_00935)	dppC	202763..203665 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
V6M96_RS00940 (V6M96_00940)	amiE	203676..204659 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
V6M96_RS00945 (V6M96_00945)	dppF	204656..205660 (+)	1005	WP_000107036.1	dipeptide ABC transporter ATP-binding subunit DppF	-
V6M96_RS00950 (V6M96_00950)	yhjV	205690..206961 (-)	1272	WP_001626220.1	aromatic amino acid transport family protein	-
V6M96_RS00955 (V6M96_00955)	-	207437..207544 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6M96_RS00960 (V6M96_00960)	-	207920..208027 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
V6M96_RS00965 (V6M96_00965)	-	208403..208510 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=855031 V6M96_RS00940 WP_001196486.1 203676..204659(+) (amiE) [Escherichia coli strain L26]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=855031 V6M96_RS00940 WP_001196486.1 203676..204659(+) (amiE) [Escherichia coli strain L26]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
AGTGGGTTTCCAGATCATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACT
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATTGCGATGGCCATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTTGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404