Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   QY056_RS07625 Genome accession   NZ_CP129636
Coordinates   1628344..1628970 (+) Length   208 a.a.
NCBI ID   WP_023315767.1    Uniprot ID   A0A837FJ36
Organism   Enterobacter hormaechei subsp. xiangfangensis strain Eh8322_LBHALD     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1623344..1633970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QY056_RS07605 (QY056_07605) - 1623743..1625503 (-) 1761 WP_032657964.1 Lon protease family protein -
  QY056_RS07610 (QY056_07610) matP 1625690..1626142 (+) 453 WP_003858158.1 macrodomain Ter protein MatP -
  QY056_RS07615 (QY056_07615) ompA 1626208..1627260 (-) 1053 WP_003858156.1 porin OmpA -
  QY056_RS07620 (QY056_07620) sulA 1627617..1628126 (-) 510 WP_032610196.1 SOS-induced cell division inhibitor SulA -
  QY056_RS07625 (QY056_07625) sxy/tfoX 1628344..1628970 (+) 627 WP_023315767.1 TfoX/Sxy family DNA transformation protein Regulator
  QY056_RS07630 (QY056_07630) yccS 1628927..1631089 (-) 2163 WP_022650744.1 YccS family putative transporter -
  QY056_RS07635 (QY056_07635) - 1631108..1631554 (-) 447 WP_003858149.1 YccF domain-containing protein -
  QY056_RS07640 (QY056_07640) helD 1631677..1633731 (+) 2055 WP_032657966.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24002.57 Da        Isoelectric Point: 9.4592

>NTDB_id=854704 QY056_RS07625 WP_023315767.1 1628344..1628970(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain Eh8322_LBHALD]
MKKISYERIYQSQEYLSPLGEIHHRALFGGYTLAVDEAVFAMVSDGELYLRACEQSAKYCVKNASSFLTLMKRGRPVLLN
YYRVDEGLWQNREKLLQLSSFALDAARKERYQRHQRNRLKDLPNLTFQIEVLLMEAGITNEETLRQLGAKTSWLKMRSKN
KALSIRVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQGHHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=854704 QY056_RS07625 WP_023315767.1 1628344..1628970(+) (sxy/tfoX) [Enterobacter hormaechei subsp. xiangfangensis strain Eh8322_LBHALD]
ATGAAAAAGATATCTTATGAGCGGATTTATCAATCTCAAGAATACCTCTCTCCGCTGGGCGAAATTCATCATCGCGCCCT
GTTTGGCGGTTATACCCTGGCCGTGGATGAAGCGGTGTTCGCGATGGTGTCTGACGGCGAGCTGTACCTTCGCGCCTGTG
AGCAAAGTGCAAAATACTGTGTAAAAAACGCTTCCTCTTTTCTGACCCTGATGAAACGAGGACGCCCAGTGCTGCTTAAT
TACTACCGTGTGGACGAAGGTCTGTGGCAAAACAGGGAAAAACTGCTTCAGCTCTCCTCGTTTGCGCTCGATGCCGCCAG
GAAAGAGCGCTACCAGCGCCATCAGCGTAACCGGCTTAAAGATCTGCCGAACCTGACCTTTCAGATTGAGGTCCTGCTTA
TGGAGGCGGGCATTACCAATGAAGAGACGCTACGACAGTTGGGGGCGAAGACGAGCTGGCTGAAAATGCGCTCGAAGAAT
AAAGCGCTGAGTATCCGGGTATTGTTCGCGCTTGAAGGCGCGATTGAAGGGTTACATGAAGCGGCACTCCCGGCGGATAT
TCGCCGGGAGCTTACGGAGTGGTTTAATGCGCTGCCTGAGTCGCAGGGCCATCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A837FJ36

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.911

97.115

0.572