Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   V2W30_RS35965 Genome accession   NZ_CP146022
Coordinates   7846064..7848448 (-) Length   794 a.a.
NCBI ID   WP_338702787.1    Uniprot ID   A0ACD5ALY1
Organism   Streptomyces sp. Q6     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 7841064..7853448
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V2W30_RS35945 (V2W30_35945) - 7841514..7842551 (+) 1038 WP_338702783.1 hypothetical protein -
  V2W30_RS35950 (V2W30_35950) - 7842569..7843204 (+) 636 WP_338702784.1 hypothetical protein -
  V2W30_RS35955 (V2W30_35955) - 7843201..7844526 (+) 1326 WP_338702785.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein -
  V2W30_RS35960 (V2W30_35960) - 7844570..7846078 (+) 1509 WP_338702786.1 acyl-CoA synthetase -
  V2W30_RS35965 (V2W30_35965) uvrA 7846064..7848448 (-) 2385 WP_338702787.1 excinuclease ABC subunit UvrA Machinery gene
  V2W30_RS35970 (V2W30_35970) - 7848515..7849522 (-) 1008 WP_338702788.1 LLM class flavin-dependent oxidoreductase -
  V2W30_RS35975 (V2W30_35975) - 7849594..7850082 (+) 489 WP_338702789.1 hypothetical protein -
  V2W30_RS35980 (V2W30_35980) - 7850121..7850348 (-) 228 WP_338702790.1 dodecin -
  V2W30_RS35985 (V2W30_35985) - 7850626..7851909 (+) 1284 WP_338702791.1 extracellular solute-binding protein -
  V2W30_RS35990 (V2W30_35990) egtD 7851940..7852902 (-) 963 WP_338702792.1 L-histidine N(alpha)-methyltransferase -

Sequence

Protein


Download         Length: 794 a.a.        Molecular weight: 85173.35 Da        Isoelectric Point: 6.7334

>NTDB_id=854619 V2W30_RS35965 WP_338702787.1 7846064..7848448(-) (uvrA) [Streptomyces sp. Q6]
MPHPDSPDPRHDGLVRVRGAREHNLRGVDVDVPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRRYFESVAPYARRLIHQVG
APKVGEISGLPPAVSLQQSRSAPTSRSSVGTVTTLSNSLRMLFSRAGRYPAGAERLDSDAFSPNTAAGACPRCHGIGRVH
RTTEALLVPDPGLSIREGAIAAWPGAWQGKNLRDILDALGHDVDRPWRELEQADRDWILFTDEQPVVTVHPVRDADRIQR
PYQGTYMSADRYVLKTFADSKSQSLRAKAEKFLESTPCPVCGGARLRAESLAVTFAGRTIAELARLPLSELADALSTPGD
ASETARVLTDDLRARLATVTELGLGYLALDRPTPTLSAGELQRLRLATQLRSGLFGVVYVLDEPSAGLHPADTESLLTVL
DRLKAAGNSVFVVEHHLDVMRHADWLVDVGPLAGEHGGRVLHSGPVAGLRDVPDSATARFLFDDSPAVERHVREPRGWLK
VGPVTRHNLRDVTAEFPFGAFTAVTGVSGSGKSTLIGEITEELDGVGRLVVVDQKPIGRTPRSNLATYTGLFDVVRKLFA
GTDAAKERGYGVGRFSFNVPGGRCETCQGEGFVSVELLFLPSTYAPCPDCGGARYNPETLQVTYRGRSIAEVLDLTVESA
TAFFTDAAAAGDDAARPVLRSLRTLLDVGLGYLRLGQPATELSGGEAQRIKLASELQRVRRGHTLYLLDEPTTGLHPADV
EVLLRQLHGLVDAGHSVVVVEHDMAVVAGADWVVDLGPGGGDAGGRVVVAGPPRLVAADPDSRTAPYLARLLHR

Nucleotide


Download         Length: 2385 bp        

>NTDB_id=854619 V2W30_RS35965 WP_338702787.1 7846064..7848448(-) (uvrA) [Streptomyces sp. Q6]
ATGCCCCACCCCGACTCGCCCGACCCCCGCCACGACGGTCTCGTCCGGGTGCGCGGCGCCCGCGAGCACAACCTCCGGGG
CGTCGACGTGGACGTGCCGCGCGATGTGCTGGCGGTCTTCACGGGGGTGTCGGGGTCGGGGAAGTCGTCCCTCGCGTTCG
GGACGATCTACGCGGAGGCGCAGCGCCGCTACTTCGAGTCGGTCGCCCCGTACGCGCGCCGCCTCATCCACCAGGTGGGC
GCCCCGAAGGTCGGCGAGATCAGCGGGCTGCCGCCGGCGGTGTCGCTCCAGCAGAGCCGCTCGGCGCCGACGTCGCGCTC
CTCGGTCGGCACGGTGACCACGCTGTCGAACTCGCTGCGCATGCTGTTCTCGCGGGCGGGCCGCTATCCGGCGGGCGCCG
AGCGGCTCGACTCCGACGCGTTCTCGCCGAACACGGCGGCCGGGGCGTGCCCCCGGTGCCACGGGATCGGCCGCGTGCAC
CGGACCACCGAGGCGCTGCTGGTCCCCGATCCCGGCCTGTCGATCCGCGAGGGCGCCATCGCCGCGTGGCCCGGCGCCTG
GCAGGGCAAGAACCTGCGCGACATCCTCGACGCGCTCGGCCACGACGTGGACCGTCCCTGGCGCGAGCTGGAGCAGGCCG
ACCGGGACTGGATCCTGTTCACGGACGAGCAGCCGGTGGTGACGGTGCACCCGGTGCGCGACGCCGACCGCATCCAACGC
CCGTACCAGGGCACGTACATGAGCGCCGACCGCTATGTACTGAAGACGTTCGCGGACTCCAAGAGCCAGTCGCTGCGGGC
GAAGGCGGAGAAGTTCCTGGAGAGCACGCCGTGCCCGGTGTGCGGGGGCGCGCGGCTGCGCGCGGAGTCGCTGGCCGTGA
CGTTCGCCGGGCGCACCATCGCGGAGCTCGCGCGGCTGCCCTTGTCCGAGCTGGCCGACGCGCTCTCGACGCCGGGCGAC
GCCTCGGAGACGGCGCGGGTGCTGACCGACGATCTGCGGGCCCGGCTCGCCACGGTCACCGAGCTCGGCCTCGGCTACCT
CGCGCTGGACCGGCCGACGCCGACGCTCTCGGCGGGCGAGCTACAACGTCTGCGTCTGGCCACGCAGTTGAGGTCCGGTC
TGTTCGGTGTGGTGTACGTCCTGGACGAGCCGTCGGCCGGCCTGCACCCGGCCGACACCGAGTCGCTCCTGACCGTCCTC
GACCGACTCAAGGCCGCGGGCAACTCGGTGTTCGTGGTCGAGCACCACCTCGACGTGATGCGCCACGCGGACTGGCTGGT
CGACGTGGGGCCGCTGGCCGGGGAGCACGGCGGGCGGGTCCTGCACAGCGGACCGGTGGCGGGGCTGCGGGACGTCCCGG
ACTCGGCGACCGCGCGCTTCCTCTTCGACGACTCCCCCGCCGTCGAACGTCACGTCCGTGAACCCCGGGGCTGGTTGAAG
GTCGGACCGGTGACCCGGCACAACCTGCGGGACGTGACCGCGGAGTTCCCGTTCGGCGCGTTCACGGCCGTCACCGGAGT
GTCCGGGTCGGGGAAGTCGACGCTGATCGGTGAGATCACGGAGGAACTCGACGGCGTCGGGCGGCTCGTGGTCGTCGACC
AGAAGCCGATCGGGCGTACGCCGCGCTCCAACCTGGCCACGTACACGGGCCTCTTCGACGTCGTGCGCAAACTCTTCGCG
GGCACGGACGCGGCGAAGGAACGCGGGTACGGGGTCGGGCGGTTCTCGTTCAACGTGCCGGGCGGGCGCTGCGAGACATG
TCAGGGCGAGGGCTTCGTCAGCGTCGAACTCCTCTTCCTGCCGAGCACGTACGCGCCGTGCCCGGACTGCGGGGGCGCGC
GCTACAACCCCGAGACGCTCCAGGTGACCTACCGGGGGCGGAGCATCGCGGAGGTGCTCGATCTGACGGTGGAGTCGGCC
ACCGCGTTCTTCACGGACGCGGCCGCGGCGGGCGACGACGCGGCCCGGCCGGTGCTGCGCAGTCTGCGCACGCTGCTGGA
CGTGGGTCTCGGCTATCTCCGGCTCGGCCAGCCCGCGACCGAGCTGTCCGGGGGTGAGGCCCAACGCATCAAGCTGGCGA
GCGAGTTGCAGCGTGTGCGGCGCGGGCACACGCTGTATCTGCTCGACGAGCCGACCACCGGGCTGCACCCCGCCGATGTG
GAGGTGCTGCTGCGCCAGCTCCACGGTCTCGTCGACGCGGGCCACTCCGTGGTGGTCGTCGAGCACGACATGGCGGTGGT
CGCCGGCGCGGACTGGGTCGTCGACCTGGGTCCGGGCGGCGGTGACGCGGGCGGCCGGGTCGTCGTCGCTGGCCCGCCCC
GGCTGGTGGCCGCCGACCCGGACAGCCGCACCGCCCCTTACCTGGCCCGGCTACTGCACCGCTGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(489-712)

UvrA DNA-binding domain (UvrA_DNA-bind)

(165-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

40.331

91.184

0.368
  uvrA Streptococcus pneumoniae TIGR4

40.331

91.184

0.368
  uvrA Streptococcus pneumoniae D39

40.331

91.184

0.368